Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RPL7P28-201ENST00000437739 740 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 MTND4P25-201ENST00000441039 533 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.61□□□□□ -1.83
CDT1Q9H211 MTATP6P30-201ENST00000443540 664 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 DPPA3P1-201ENST00000448050 469 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.61□□□□□ -1.83
CDT1Q9H211 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.61□□□□□ -1.83
CDT1Q9H211 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.61□□□□□ -1.83
CDT1Q9H211 CENPBD1P1-201ENST00000464061 469 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 KCTD9P5-201ENST00000504141 1170 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 MIR2114-201ENST00000516645 80 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 AC103783.1-201ENST00000520506 373 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.61□□□□□ -1.83
CDT1Q9H211 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.61□□□□□ -1.83
CDT1Q9H211 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.61□□□□□ -1.83
CDT1Q9H211 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.61□□□□□ -1.83
CDT1Q9H211 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.61□□□□□ -1.83
CDT1Q9H211 AC104458.1-201ENST00000608243 463 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 AL161734.1-201ENST00000609720 557 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 AC245517.5-201ENST00000611529 162 ntBASIC3.61□□□□□ -1.83
CDT1Q9H211 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.61□□□□□ -1.83
CDT1Q9H211 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.61□□□□□ -1.83
CDT1Q9H211 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CDT1Q9H211 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDT1Q9H211 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
CDT1Q9H211 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CDT1Q9H211 AC017071.1-201ENST00000564407 2204 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.6□□□□□ -1.83
CDT1Q9H211 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.6□□□□□ -1.83
CDT1Q9H211 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 RNU6-600P-201ENST00000362524 99 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 Y_RNA.38-201ENST00000362617 102 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 RNU5A-8P-201ENST00000364102 114 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 Y_RNA.381-201ENST00000365666 102 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 RNU6-637P-201ENST00000384050 107 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 RNU6-483P-201ENST00000384088 108 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 MIR491-201ENST00000384877 84 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 RNU2-8P-201ENST00000410727 190 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 RNU6-516P-201ENST00000411381 104 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.6□□□□□ -1.83
CDT1Q9H211 AL356968.1-201ENST00000416622 474 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC007283.2-201ENST00000424739 197 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC079780.1-201ENST00000428259 207 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC119618.1-201ENST00000434191 222 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.6□□□□□ -1.83
CDT1Q9H211 USP9YP15-201ENST00000442391 422 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 C1DP4-201ENST00000455429 424 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.6□□□□□ -1.83
CDT1Q9H211 RPL7P23-201ENST00000493874 747 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC117522.1-201ENST00000509821 380 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC114781.4-201ENST00000513707 639 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 SNORA31.20-201ENST00000517111 133 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 SNORA70.24-201ENST00000517233 118 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AP001893.2-201ENST00000526949 202 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.6□□□□□ -1.83
CDT1Q9H211 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.6□□□□□ -1.83
CDT1Q9H211 AP000857.1-201ENST00000532151 543 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 AC018630.1-201ENST00000541376 925 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.6□□□□□ -1.83
CDT1Q9H211 AC015917.1-201ENST00000579654 510 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 MIR5195-201ENST00000583555 115 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC091135.1-201ENST00000585943 307 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 KC877982.1-201ENST00000602313 470 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC245014.2-201ENST00000603689 287 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC246785.4-201ENST00000605374 287 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC073657.2-201ENST00000605661 303 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC006023.2-201ENST00000609916 167 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC017083.3-201ENST00000609955 700 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AL590282.1-201ENST00000610379 1136 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AL353748.2-201ENST00000622148 471 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 MIR3651-201ENST00000630427 90 ntBASIC3.6□□□□□ -1.83
CDT1Q9H211 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.6□□□□□ -1.83
CDT1Q9H211 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDT1Q9H211 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDT1Q9H211 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDT1Q9H211 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDT1Q9H211 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CDT1Q9H211 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.59□□□□□ -1.83
CDT1Q9H211 RNU6-181P-201ENST00000363225 107 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 RNY3P13-201ENST00000365542 102 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDT1Q9H211 RNU6-1103P-201ENST00000384150 107 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDT1Q9H211 AMD1P2-201ENST00000412936 992 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.59□□□□□ -1.83
CDT1Q9H211 AC099677.1-201ENST00000420575 175 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.59□□□□□ -1.83
CDT1Q9H211 PIGFP2-201ENST00000421400 651 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.59□□□□□ -1.83
CDT1Q9H211 FCF1P1-201ENST00000432690 571 ntBASIC3.59□□□□□ -1.83
CDT1Q9H211 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.59□□□□□ -1.83
CDT1Q9H211 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms