Protein–RNA interactions for Protein: Q9BXW4

MAP1LC3C, Microtubule-associated proteins 1A/1B light chain 3C, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3CQ9BXW4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
MAP1LC3CQ9BXW4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 RPL21P132-201ENST00000331267 462 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AL445529.1-201ENST00000398713 389 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AL021407.1-201ENST00000404531 386 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 RPL36AP53-201ENST00000432891 316 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 RPS20P5-201ENST00000434808 360 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 HMGN1P15-201ENST00000513870 295 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 SNORA31.25-201ENST00000517242 134 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 CBX3P7-201ENST00000532876 502 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AL121821.2-201ENST00000556081 394 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC007336.1-201ENST00000576365 3828 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 MIR4529-201ENST00000578110 78 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AP001269.3-201ENST00000588718 329 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 VN1R83P-201ENST00000595685 445 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC091057.3-201ENST00000602684 733 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC098826.3-201ENST00000603823 466 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AL161798.1-201ENST00000604630 131 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC107294.1-201ENST00000609524 467 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 AC012442.3-202ENST00000636742 206 ntBASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
MAP1LC3CQ9BXW4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 RNU6-658P-201ENST00000384606 106 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 MIR1284-201ENST00000408337 120 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 USP9YP6-201ENST00000413550 854 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC022018.1-201ENST00000430685 241 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC010631.1-201ENST00000474150 156 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 RN7SL293P-201ENST00000481765 281 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 RN7SKP258-201ENST00000517151 304 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 MIR3126-201ENST00000577443 74 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC060771.1-201ENST00000582031 164 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AL138963.2-201ENST00000605137 226 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC004908.2-201ENST00000609090 574 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC123767.1-202ENST00000620407 817 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC244517.12-201ENST00000623581 663 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 AC026422.1-201ENST00000623961 452 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 PCMTD1P7-201ENST00000634506 357 ntBASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MAP1LC3CQ9BXW4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 RNU6-289P-201ENST00000364093 107 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 RN7SKP227-201ENST00000364445 330 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 SNORA71.1-201ENST00000364523 117 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 RNA5SP240-201ENST00000365355 128 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 AL162578.1-201ENST00000406202 378 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 MIR1302-8-201ENST00000408342 128 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 U3.37-201ENST00000408528 213 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 RNA5SP120-201ENST00000410900 112 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 AIMP1P2-201ENST00000425294 312 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 RPL23AP76-201ENST00000441860 458 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 ELOCP30-201ENST00000447108 299 ntBASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.88□□□□□ -2.11
MAP1LC3CQ9BXW4 AC005410.1-202ENST00000460347 485 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms