Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RNU6-798P-201ENST00000516912 103 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 RNU6-548P-201ENST00000517083 115 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 SNORA31.22-201ENST00000517204 135 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 PRELID2P1-201ENST00000552837 301 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AL512347.1-201ENST00000566420 503 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 MIR3609-201ENST00000582661 80 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC004987.4-201ENST00000603383 338 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC025811.1-201ENST00000604312 472 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 NUTF2P8-201ENST00000604593 363 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC002550.2-201ENST00000621246 394 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AL445264.1-201ENST00000621719 171 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 AC099063.3-201ENST00000642066 185 ntBASIC2.74□□□□□ -1.97
RPAP1Q9BWH6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AC104454.1-201ENST00000421341 1401 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 RNU6-343P-201ENST00000364709 104 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 RNU1-91P-201ENST00000364746 163 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 MIR1290-201ENST00000408735 78 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 HMGB1P11-201ENST00000413899 637 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AC007327.1-201ENST00000447461 264 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 MTATP6P14-201ENST00000455189 673 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AC010099.1-201ENST00000455434 375 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 snoU13.8-201ENST00000458890 104 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AC104090.1-201ENST00000506341 1171 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 DEFB131D-201ENST00000526803 184 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 MIR6130-201ENST00000619419 109 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 AC009269.6-201ENST00000621778 588 ntBASIC2.73□□□□□ -1.97
RPAP1Q9BWH6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AC009487.4-201ENST00000624969 3585 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AC005832.2-201ENST00000538921 1430 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AL390862.1-201ENST00000635467 1469 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 RNU5A-1-201ENST00000362698 116 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 RNU6-1176P-201ENST00000390955 107 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AL136310.1-201ENST00000404926 654 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 RPS15AP7-201ENST00000439294 405 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 FAM172BP-201ENST00000487497 1089 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 RNU6-714P-201ENST00000516963 103 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AP000867.2-201ENST00000532468 320 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AL158211.4-201ENST00000606988 584 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AL121652.1-201ENST00000608851 448 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 MIR6873-201ENST00000622788 63 ntBASIC2.72□□□□□ -1.97
RPAP1Q9BWH6 AC087359.1-201ENST00000508335 1740 ntBASIC2.71□□□□□ -1.97
RPAP1Q9BWH6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RPAP1Q9BWH6 ZNF355P-201ENST00000427301 3216 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 Y_RNA.234-201ENST00000364409 97 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 RNU6-1027P-201ENST00000383998 107 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC018630.2-202ENST00000422992 927 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC092427.1-202ENST00000430569 476 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 LSM1P1-201ENST00000438629 273 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC002381.1-201ENST00000447049 280 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 SNORD121B-201ENST00000458838 81 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC004263.1-201ENST00000479327 332 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 RPL30P5-201ENST00000494923 336 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 HSPE1P18-201ENST00000517602 280 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 MTND2P7-201ENST00000521337 640 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC021451.1-201ENST00000523498 1129 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 ACTR3BP3-201ENST00000565577 979 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 OR4K7P-201ENST00000580232 945 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 NRBF2P1-201ENST00000587407 859 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 BBIP1P1-201ENST00000602999 279 ntBASIC2.71□□□□□ -1.98
RPAP1Q9BWH6 AC019159.1-201ENST00000605094 187 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms