Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 BX295541.1-201ENST00000417774 250 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 RPS15AP12-201ENST00000419498 388 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC018630.2-202ENST00000422992 927 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 ISCA1P6-201ENST00000427740 390 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 RPL31P35-201ENST00000431058 377 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 MTATP6P30-201ENST00000443540 664 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC114797.1-201ENST00000514003 728 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 Vault.3-201ENST00000516676 95 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 SNORA70.24-201ENST00000517233 118 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC090572.1-201ENST00000519251 160 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC007458.1-201ENST00000542812 373 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC245014.2-201ENST00000603689 287 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AL022154.1-201ENST00000604698 785 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC008277.2-201ENST00000605196 797 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC246785.4-201ENST00000605374 287 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 MIR7851-201ENST00000610611 160 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC013476.2-201ENST00000614456 459 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC072046.2-201ENST00000618366 268 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC091953.5-201ENST00000622919 233 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AL359740.1-201ENST00000624340 592 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 MTND5P7-201ENST00000413558 1798 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 MTND5P26-201ENST00000426018 1752 ntBASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
TRAF4Q9BUZ4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC092447.7-201ENST00000422212 1621 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 RNU6-525P-201ENST00000363685 104 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 DEFB109C-201ENST00000382575 264 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 DEFB109B-201ENST00000382656 264 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 RNU6-259P-201ENST00000383999 107 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 Y_RNA.517-201ENST00000384551 106 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 MIR514A1-201ENST00000385133 98 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 TXNP7-201ENST00000406296 293 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 RNU2-36P-201ENST00000410361 191 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC093151.1-201ENST00000427711 313 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 DPPA2P1-201ENST00000428060 556 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC097713.2-201ENST00000430199 356 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 USP12PX-201ENST00000432383 1057 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL353705.1-201ENST00000433468 480 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 HMGB1P12-201ENST00000438594 598 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL136380.1-201ENST00000447970 162 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 NANOGNBP1-201ENST00000448444 480 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 RPS4XP13-201ENST00000483219 789 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AL139286.2-201ENST00000606838 396 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 AC013562.2-201ENST00000611632 603 ntBASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.09□□□□□ -1.91
TRAF4Q9BUZ4 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms