Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC103987.3-201ENST00000582071 292 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AP001429.1-201ENST00000602568 530 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AL356575.1-201ENST00000603008 283 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-87P-201ENST00000607561 108 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC004908.2-201ENST00000609090 574 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC109347.2-201ENST00000610220 349 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AP001506.1-201ENST00000615444 211 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC091953.5-201ENST00000622919 233 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 MIR4275-201ENST00000636486 87 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC012442.3-202ENST00000636742 206 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC099654.13-201ENST00000639774 207 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 MAPK10-266ENST00000641066 6555 ntBASIC2.84□□□□□ -1.96
CCDC28BQ9BUN5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.84□□□□□ -1.96
CCDC28BQ9BUN5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-223P-201ENST00000362830 107 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 SNORD21-201ENST00000383953 95 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 SNORA75-201ENST00000384158 137 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 MIR512-1-201ENST00000384913 84 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 SNORA40.3-201ENST00000390964 122 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 FCF1P10-201ENST00000407590 479 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 DUTP6-201ENST00000425573 462 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC091286.1-201ENST00000431233 461 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 SNRPEP4-201ENST00000435815 279 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 RAC1P7-201ENST00000445367 377 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 MTND1P27-201ENST00000451117 902 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC117440.1-201ENST00000474107 571 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 SCARNA13-201ENST00000516672 275 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC022616.6-201ENST00000520479 119 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 RPL21P5-201ENST00000554662 472 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AL356432.3-201ENST00000568952 465 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 OR4K8P-201ENST00000578842 1048 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC138761.3-201ENST00000579993 334 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 COX6CP3-201ENST00000580869 223 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 MIR3682-201ENST00000581338 84 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 MIR3611-201ENST00000584484 83 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC009977.1-201ENST00000586015 570 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC060766.3-201ENST00000591442 263 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC121334.2-201ENST00000605387 271 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AL355472.4-201ENST00000610233 626 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC068831.8-201ENST00000620171 435 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AL360181.4-201ENST00000621752 134 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 AC010149.2-201ENST00000637608 315 ntBASIC2.83□□□□□ -1.96
CCDC28BQ9BUN5 TAB3P1-202ENST00000452645 1634 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 ZNF807-201ENST00000328088 1707 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 MIR6073-201ENST00000352083 89 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 DEFA7P-201ENST00000382676 285 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 CD24P4-201ENST00000382840 243 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-1119P-201ENST00000384349 108 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 SNORD116-4-201ENST00000384733 96 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 SNORA57.1-201ENST00000391227 145 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-248P-201ENST00000410720 107 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-516P-201ENST00000411381 104 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AL663109.1-201ENST00000411498 844 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 RPS3AP3-201ENST00000411933 242 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 MTCO1P39-201ENST00000426148 480 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 MTND6P13-201ENST00000443510 523 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC109464.2-201ENST00000510242 943 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 TBCAP3-201ENST00000512475 312 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC026801.2-201ENST00000515352 425 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 Y_RNA.655-201ENST00000515919 96 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC090136.1-201ENST00000520009 240 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC125611.2-201ENST00000551907 647 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 DNAJC8P1-201ENST00000554535 372 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 SEPT7P9-203ENST00000604116 343 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms