Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC091564.4-201ENST00000533934 2194 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 SNORD67-201ENST00000390833 111 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 RPL22P17-201ENST00000438729 315 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 TRIM60P18-201ENST00000441518 828 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC013267.1-201ENST00000458227 267 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 RN7SL20P-201ENST00000488827 297 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC010486.2-201ENST00000505572 483 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 MTND5P13-201ENST00000513046 1079 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 RN7SKP258-201ENST00000517151 304 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC009812.2-201ENST00000517657 457 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC025881.1-201ENST00000518851 512 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC022080.3-201ENST00000544433 482 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 ZNF519P3-201ENST00000557158 1032 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 H3F3AP1-201ENST00000559984 334 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 MIR5697-201ENST00000578045 78 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AL022161.1-201ENST00000604390 213 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC092354.1-201ENST00000606057 376 ntBASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SDF4Q9BRK5 AC008264.2-201ENST00000610193 3731 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 MIR22-201ENST00000362190 85 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 SNORA51.4-201ENST00000364993 124 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 RNU6-533P-201ENST00000384144 107 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 UBA52P6-201ENST00000399822 382 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 RN7SKP220-201ENST00000410611 288 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 RNU2-62P-201ENST00000410868 191 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AL445567.1-201ENST00000439121 144 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 MTATP6P30-201ENST00000443540 664 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 NANOGNBP1-201ENST00000448444 480 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 EPS15P1-201ENST00000448836 336 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 snoU13.28-201ENST00000459235 104 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC087588.1-201ENST00000462203 316 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 KC877373.1-201ENST00000479066 408 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC109486.1-201ENST00000486833 374 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 RN7SL633P-201ENST00000488974 297 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 RPF2P2-201ENST00000504693 896 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC022616.6-201ENST00000520479 119 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC083760.1-201ENST00000589621 670 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AL133393.1-201ENST00000603277 287 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC239868.4-201ENST00000608318 671 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AL391813.2-201ENST00000609113 322 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 AC108747.1-201ENST00000609508 535 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 uc_338.12-201ENST00000616344 181 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.47□□□□□ -1.85
SDF4Q9BRK5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SDF4Q9BRK5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 CD24P4-201ENST00000382840 243 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 RNU6-198P-201ENST00000384258 104 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 SAR1AP2-201ENST00000392696 594 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 MTCYBP36-201ENST00000404146 440 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 Y_RNA.608-201ENST00000410647 95 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 RPL35AP12-201ENST00000425362 338 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 AC007919.1-201ENST00000429380 217 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 MED14P1-201ENST00000430517 648 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.46□□□□□ -1.86
SDF4Q9BRK5 AL714022.1-201ENST00000439897 151 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 MTND1P30-201ENST00000441241 901 ntBASIC3.46□□□□□ -1.86
SDF4Q9BRK5 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms