Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AL365440.1-201ENST00000436135 2167 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC007823.1-201ENST00000569932 1566 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 RNU5E-4P-201ENST00000364931 120 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 RNU6-169P-201ENST00000365336 107 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 Y_RNA.402-201ENST00000383972 102 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 RNU6-483P-201ENST00000384088 108 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 MIR449B-201ENST00000384995 97 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 RPL7P60-201ENST00000397636 735 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC092447.6-201ENST00000414578 210 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 RPL30P16-201ENST00000419341 429 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC091286.1-201ENST00000431233 461 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC119618.1-201ENST00000434191 222 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 RAC1P7-201ENST00000445367 377 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AL358232.1-201ENST00000448030 501 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 HMGB1P25-201ENST00000468402 607 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC034236.1-201ENST00000469891 373 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 RNA5SP337-201ENST00000517007 109 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC022616.3-201ENST00000523940 148 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 SETP2-201ENST00000553886 926 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AL512360.1-201ENST00000555346 234 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 BNIP3P30-201ENST00000601184 574 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC017083.3-201ENST00000609955 700 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC002550.2-201ENST00000621246 394 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC139792.3-201ENST00000623525 224 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 AC019226.1-201ENST00000625666 515 ntBASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TUBA1CQ9BQE3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RNU6-1085P-201ENST00000363576 107 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RNA5SP51-201ENST00000364750 119 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RNA5SP424-201ENST00000390988 115 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RNA5SP56-201ENST00000410277 118 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RNU4-78P-201ENST00000410940 126 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RN7SKP53-201ENST00000411337 315 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 SYF2P2-201ENST00000417620 583 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 MTCO1P20-201ENST00000425366 358 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RPL23AP69-201ENST00000431134 458 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 TIMM9P1-201ENST00000436122 256 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RPS15AP9-201ENST00000439856 381 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AL136380.1-201ENST00000447970 162 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC010285.1-201ENST00000470580 392 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RPS26P21-201ENST00000475397 348 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 RPL23AP41-201ENST00000484754 458 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC023194.1-201ENST00000493084 308 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC104619.4-201ENST00000510773 249 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 SNORA64.4-201ENST00000516632 81 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 Y_RNA.693-201ENST00000516641 110 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 SNORA31.26-201ENST00000517250 137 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC008739.3-201ENST00000603262 127 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC012507.3-201ENST00000603556 477 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC008277.2-201ENST00000605196 797 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC004067.1-201ENST00000608733 700 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 AC002553.4-201ENST00000616896 331 ntBASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
TUBA1CQ9BQE3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms