Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 RPS15AP34-201ENST00000487776 387 ntBASIC1.68□□□□□ -2.14
ABCA3Q99758 HMGB1P22-201ENST00000505315 124 ntBASIC1.68□□□□□ -2.14
ABCA3Q99758 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.68□□□□□ -2.14
ABCA3Q99758 AC090821.2-201ENST00000523552 176 ntBASIC1.68□□□□□ -2.14
ABCA3Q99758 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.68□□□□□ -2.14
ABCA3Q99758 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.68□□□□□ -2.14
ABCA3Q99758 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.67□□□□□ -2.14
ABCA3Q99758 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ABCA3Q99758 RNY1P4-201ENST00000384595 115 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 SNORA1.3-201ENST00000384676 136 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 RNU2-21P-201ENST00000410368 188 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 MTND5P25-201ENST00000430499 799 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ABCA3Q99758 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.67□□□□□ -2.14
ABCA3Q99758 ARL5AP3-201ENST00000439327 386 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 MTCO1P48-201ENST00000448024 1096 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 AP000907.2-201ENST00000530827 353 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 AC009090.3-201ENST00000616553 565 ntBASIC1.67□□□□□ -2.14
ABCA3Q99758 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ABCA3Q99758 SNORA38-201ENST00000363946 132 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 FABP5P3-201ENST00000437960 408 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 MTCYBP34-201ENST00000439552 670 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 HSPE1P3-201ENST00000559254 309 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA3Q99758 DDX43P2-201ENST00000604753 1354 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 RNU6-666P-201ENST00000363499 107 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.66□□□□□ -2.14
ABCA3Q99758 RNU6-193P-201ENST00000410977 107 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 AL512504.1-201ENST00000415494 778 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 MTCYBP24-201ENST00000420387 1106 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.66□□□□□ -2.14
ABCA3Q99758 MTND1P18-201ENST00000448191 573 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.66□□□□□ -2.14
ABCA3Q99758 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
ABCA3Q99758 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
ABCA3Q99758 AC087854.1-201ENST00000519706 414 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.66□□□□□ -2.14
ABCA3Q99758 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 AC022662.1-201ENST00000580252 331 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.66□□□□□ -2.14
ABCA3Q99758 AC068880.5-201ENST00000624331 290 ntBASIC1.66□□□□□ -2.14
ABCA3Q99758 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
ABCA3Q99758 RNA5SP391-201ENST00000363456 119 ntBASIC1.65□□□□□ -2.15
ABCA3Q99758 RNU6-203P-201ENST00000384038 104 ntBASIC1.65□□□□□ -2.15
ABCA3Q99758 RNU1-52P-201ENST00000384190 164 ntBASIC1.65□□□□□ -2.15
ABCA3Q99758 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.65□□□□□ -2.15
ABCA3Q99758 RPL7P18-201ENST00000478965 734 ntBASIC1.65□□□□□ -2.15
ABCA3Q99758 RPL30P14-201ENST00000482744 348 ntBASIC1.65□□□□□ -2.15
ABCA3Q99758 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA3Q99758 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.65□□□□□ -2.15
ABCA3Q99758 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.65□□□□□ -2.15
ABCA3Q99758 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.65□□□□□ -2.15
ABCA3Q99758 BNIP3P7-201ENST00000605641 516 ntBASIC1.65□□□□□ -2.15
ABCA3Q99758 AL355810.1-201ENST00000614629 552 ntBASIC1.65□□□□□ -2.15
ABCA3Q99758 ZNF37BP-203ENST00000452306 1352 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 RNU6-461P-201ENST00000364195 107 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 Y_RNA.251-201ENST00000364551 99 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 RNU6-882P-201ENST00000391025 103 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 RPL31P63-201ENST00000422565 375 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA3Q99758 AL583843.1-201ENST00000456070 346 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 AC010285.1-201ENST00000470580 392 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 AC015908.1-201ENST00000478739 476 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA3Q99758 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.64□□□□□ -2.15
ABCA3Q99758 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
ABCA3Q99758 MIR548Y-201ENST00000582739 110 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 AC012213.4-201ENST00000606457 354 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA3Q99758 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
ABCA3Q99758 RBBP8P1-201ENST00000449447 1844 ntBASIC1.64□□□□□ -2.15
ABCA3Q99758 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA3Q99758 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA3Q99758 MRPS17P9-201ENST00000511924 393 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA3Q99758 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA3Q99758 AC107214.2-201ENST00000608204 634 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 RNA5SP252-201ENST00000391131 119 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 RNA5SP354-201ENST00000391247 136 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 AC006548.1-201ENST00000427470 102 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 AC078857.1-201ENST00000469870 667 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 AC087343.1-201ENST00000477341 475 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
ABCA3Q99758 RNA5SP476-201ENST00000516613 103 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 MTND2P26-201ENST00000528255 1029 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
ABCA3Q99758 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA3Q99758 AC090897.2-201ENST00000581715 130 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 AC005332.10-201ENST00000612725 619 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 CR381572.1-201ENST00000625098 102 ntBASIC1.63□□□□□ -2.15
ABCA3Q99758 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA3Q99758 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA3Q99758 RNU4-91P-201ENST00000364778 135 ntBASIC1.62□□□□□ -2.15
ABCA3Q99758 SNORA46.1-201ENST00000391069 153 ntBASIC1.62□□□□□ -2.15
ABCA3Q99758 HMGN1P14-201ENST00000412459 517 ntBASIC1.62□□□□□ -2.15
ABCA3Q99758 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA3Q99758 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms