Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC087854.1-201ENST00000519706 414 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 OR8R1P-201ENST00000543943 764 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 IMMP1LP2-201ENST00000552954 492 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR4775-201ENST00000581168 75 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC060771.1-201ENST00000582031 164 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC103710.2-201ENST00000609912 942 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 U2.22-201ENST00000636441 106 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 IQCB2P-201ENST00000401788 1633 ntBASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDK5RAP1Q96SZ6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU1-35P-201ENST00000362782 153 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.135-201ENST00000363439 95 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNA5SP130-201ENST00000364431 114 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-890P-201ENST00000384121 107 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-601P-201ENST00000384540 107 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 SNORA57.1-201ENST00000391227 145 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.645-201ENST00000391229 102 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 PRRC2CP1-201ENST00000404428 159 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-847P-201ENST00000411115 108 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 DPH3P2-201ENST00000422618 250 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RPL37P1-201ENST00000432310 284 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 OR4C10P-201ENST00000434991 931 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AL353748.1-201ENST00000440753 474 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 GSTA11P-201ENST00000452866 669 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AL136126.1-201ENST00000473603 402 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RN7SL271P-201ENST00000487601 295 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RPL39P5-202ENST00000512505 151 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-488P-201ENST00000515918 99 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-976P-201ENST00000516086 111 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR5690-201ENST00000583739 73 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR5684-201ENST00000585074 65 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AL353997.4-201ENST00000586196 166 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AL592436.1-201ENST00000605135 558 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR6867-201ENST00000610636 67 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 uc_338.34-201ENST00000617467 174 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 AC138627.2-201ENST00000624202 601 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 RNA5SP196-201ENST00000625967 102 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK5RAP1Q96SZ6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-28P-201ENST00000362378 107 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.257-201ENST00000364596 102 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-450P-201ENST00000364654 107 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC117470.1-201ENST00000381974 330 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 Y_RNA.463-201ENST00000384271 102 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-441P-201ENST00000384545 106 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 SOD2P1-201ENST00000396543 562 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AL139397.2-201ENST00000404529 772 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 MIR1193-201ENST00000408109 78 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 RNA5SP39-201ENST00000411245 120 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 HSPE1P12-201ENST00000412576 301 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 HMGB1P21-201ENST00000502313 581 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC025445.1-201ENST00000502728 300 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 AC006499.6-201ENST00000511169 607 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 SNORA25.10-201ENST00000515926 124 ntBASIC4.28□□□□□ -1.72
CDK5RAP1Q96SZ6 RNU6-256P-201ENST00000516747 97 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms