Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC068135.2-201ENST00000569293 1028 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 MIR544B-201ENST00000582372 78 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AC025588.2-201ENST00000604851 466 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 OR2AS2P-201ENST00000606902 342 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AC062016.1-201ENST00000355719 319 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 SNORD56.5-201ENST00000364281 72 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 RNU1-112P-201ENST00000364401 164 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 RNU6-769P-201ENST00000384407 104 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AL512633.1-201ENST00000399931 655 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 RAP1BP1-201ENST00000412709 553 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AL022400.1-201ENST00000423946 935 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 USP12PX-201ENST00000432383 1057 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF560Q96MR9 RPL23AP20-201ENST00000447965 421 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 SNORD109B-201ENST00000458961 67 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 SNORD109A-201ENST00000459128 67 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AC119751.5-201ENST00000514077 770 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AP000857.1-201ENST00000532151 543 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AL354943.1-201ENST00000572103 781 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.92□□□□□ -1.94
ZNF560Q96MR9 MIR4999-201ENST00000585029 91 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AC002545.1-201ENST00000592511 181 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AC012119.1-201ENST00000603184 222 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AL035413.2-201ENST00000604801 525 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 BCRP9-201ENST00000605312 388 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AL136363.1-201ENST00000605349 337 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 RPL23AP88-201ENST00000605759 454 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 TUSC7.1-201ENST00000610969 165 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
ZNF560Q96MR9 AP003485.2-201ENST00000623636 610 ntBASIC2.92□□□□□ -1.94
ZNF560Q96MR9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF560Q96MR9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF560Q96MR9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ZNF560Q96MR9 MIR19A-201ENST00000384878 82 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 USP9YP26-201ENST00000421008 661 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 NUP35P1-201ENST00000422734 947 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 RNU7-59P-201ENST00000459101 61 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC008481.1-201ENST00000463278 396 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 MTND4LP3-201ENST00000468320 276 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 KC877373.1-201ENST00000479066 408 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 OR5BM1P-201ENST00000512021 366 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 RNU6-415P-201ENST00000516252 97 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AP001372.4-201ENST00000524889 472 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 HSPE1P20-201ENST00000538133 289 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 BNIP3P23-201ENST00000599655 511 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC013244.3-201ENST00000605614 388 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC012150.2-201ENST00000621300 544 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 AC007998.5-201ENST00000622938 237 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
ZNF560Q96MR9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF560Q96MR9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
ZNF560Q96MR9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 RNU1-105P-201ENST00000363470 161 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 CCNG1P1-201ENST00000406783 885 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 RNA5SP492-201ENST00000411330 114 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC007919.1-201ENST00000429380 217 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 RPL39P40-201ENST00000445481 146 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 ELOCP30-201ENST00000447108 299 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC138853.1-201ENST00000503549 823 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC098799.2-201ENST00000509466 868 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 HSPE1P23-201ENST00000509838 286 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 RNA5SP76-201ENST00000516277 87 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC090888.2-201ENST00000559765 1144 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC020895.1-201ENST00000595362 272 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 RPL23AP78-201ENST00000599928 470 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC007038.2-201ENST00000608095 740 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AP000240.1-201ENST00000609910 452 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms