Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC138Q96M89 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC138Q96M89 ZNF680P1-201ENST00000436625 1469 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 SNORA62.1-201ENST00000364287 154 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 RNU6-217P-201ENST00000384164 104 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 Y_RNA.516-201ENST00000384541 124 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 RNU6-140P-201ENST00000384566 108 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 RPS4XP8-201ENST00000402039 771 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 RNU6-1077P-201ENST00000410506 102 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 RNA5SP38-201ENST00000410750 119 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC069157.1-201ENST00000421749 137 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 ISCA1P1-201ENST00000426679 387 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 ZNF863P-201ENST00000426746 417 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 GPM6BP2-201ENST00000432046 144 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 HSPD1P21-201ENST00000436541 245 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 HMGB3P11-201ENST00000440127 604 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 GPM6BP1-201ENST00000446387 144 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 RNU7-182P-201ENST00000459009 62 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 SRRM1P2-201ENST00000464531 1192 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 RN7SL330P-201ENST00000469709 307 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 RNU6-314P-201ENST00000516574 104 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC138Q96M89 OR5AL2P-201ENST00000532185 920 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 OR8R1P-201ENST00000543943 764 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC120057.2-201ENST00000571520 271 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC006504.3-201ENST00000586818 523 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC012409.4-201ENST00000612923 249 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 MIR8058-201ENST00000615737 89 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 AC092628.2-201ENST00000622492 339 ntBASIC3.79□□□□□ -1.8
CCDC138Q96M89 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC138Q96M89 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC138Q96M89 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC138Q96M89 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC138Q96M89 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC138Q96M89 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 Y_RNA.6-201ENST00000362350 114 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 RNU6-1035P-201ENST00000384477 107 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 MIR199A2-201ENST00000385289 110 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 RPS24P13-201ENST00000442520 397 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 AL500522.2-201ENST00000448562 343 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC004801.2-202ENST00000463559 283 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 SNORA31.1-201ENST00000515993 133 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 SNORA31.5-201ENST00000516190 133 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 OR5BN1P-201ENST00000532955 829 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 ZNF519P2-201ENST00000557032 169 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 MIR4775-201ENST00000581168 75 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AL606490.9-201ENST00000603331 271 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AL021997.1-201ENST00000605757 193 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 AC139792.3-201ENST00000623525 224 ntBASIC3.78□□□□□ -1.8
CCDC138Q96M89 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC138Q96M89 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CCDC138Q96M89 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.81
CCDC138Q96M89 AL359693.1-201ENST00000614959 2407 ntBASIC3.78□□□□□ -1.81
CCDC138Q96M89 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC138Q96M89 AC091152.2-201ENST00000591628 2569 ntBASIC3.77□□□□□ -1.81
CCDC138Q96M89 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC138Q96M89 SNORD115-7-201ENST00000365306 82 ntBASIC3.77□□□□□ -1.81
CCDC138Q96M89 Y_RNA.481-201ENST00000384373 102 ntBASIC3.77□□□□□ -1.81
CCDC138Q96M89 MIR181A1-201ENST00000385026 110 ntBASIC3.77□□□□□ -1.81
CCDC138Q96M89 SNORA48.7-201ENST00000391302 135 ntBASIC3.77□□□□□ -1.81
CCDC138Q96M89 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC138Q96M89 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.77□□□□□ -1.81
CCDC138Q96M89 AC080125.1-201ENST00000414888 684 ntBASIC3.77□□□□□ -1.81
CCDC138Q96M89 AC092809.3-201ENST00000415453 231 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms