Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
DDX11Q96FC9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX11Q96FC9 MTND5P1-201ENST00000445440 1375 ntBASIC4.73□□□□□ -1.65
DDX11Q96FC9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX11Q96FC9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.73□□□□□ -1.65
DDX11Q96FC9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DDX11Q96FC9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.73□□□□□ -1.65
DDX11Q96FC9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX11Q96FC9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 Y_RNA.167-201ENST00000363735 109 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 SNORA62.1-201ENST00000364287 154 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 Y_RNA.445-201ENST00000384168 102 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 Y_RNA.459-201ENST00000384251 102 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 RNY4P36-201ENST00000391116 96 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 RNU6-1304P-201ENST00000411374 106 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 RPL31P2-201ENST00000413849 377 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DDX11Q96FC9 AL691449.1-201ENST00000426570 421 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC127537.2-201ENST00000439258 465 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 RAC1P7-201ENST00000445367 377 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 AL353691.1-201ENST00000451332 387 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC034236.1-201ENST00000469891 373 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 VN1R17P-201ENST00000472048 1090 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 S100A11P1-201ENST00000477525 312 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 RNU6-1038P-201ENST00000516516 104 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 NCAPGP2-201ENST00000557911 754 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 RPL21P12-201ENST00000559810 515 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 HSPE1P5-201ENST00000561489 272 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 MIR5685-201ENST00000579080 79 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 MIR5583-1-201ENST00000580941 59 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 MIR4775-201ENST00000581168 75 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 AC005255.1-201ENST00000593748 216 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
DDX11Q96FC9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
DDX11Q96FC9 AL138713.1-201ENST00000624026 2130 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 MTCO1P12-201ENST00000414273 1543 ntBASIC4.72□□□□□ -1.65
DDX11Q96FC9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
DDX11Q96FC9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DDX11Q96FC9 MTND4P14-201ENST00000435799 1354 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
DDX11Q96FC9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
DDX11Q96FC9 RNU6-511P-201ENST00000363496 107 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 RNU4-66P-201ENST00000365199 138 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
DDX11Q96FC9 RNA5SP171-201ENST00000391071 115 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AL592114.1-201ENST00000403842 483 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 PRPS1P1-201ENST00000445305 876 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 Y_RNA.635-201ENST00000459041 101 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC126389.1-201ENST00000477436 290 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 RNU6-864P-201ENST00000516256 108 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
DDX11Q96FC9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DDX11Q96FC9 MIR3942-201ENST00000585264 109 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC025588.3-201ENST00000604182 274 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AL022099.1-201ENST00000604551 712 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 APOOP1-201ENST00000604695 592 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 RNA5SP108-201ENST00000605921 117 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AC004908.2-201ENST00000609090 574 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 7SK.10-201ENST00000621414 298 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 AL078596.1-201ENST00000624856 447 ntBASIC4.71□□□□□ -1.66
DDX11Q96FC9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DDX11Q96FC9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
DDX11Q96FC9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DDX11Q96FC9 MAPK10-373ENST00000641983 6772 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DDX11Q96FC9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
DDX11Q96FC9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.7□□□□□ -1.66
DDX11Q96FC9 HSPE1P11-201ENST00000339579 310 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 SNORA60-201ENST00000362396 134 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 Y_RNA.373-201ENST00000365600 103 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 SNORA22B-201ENST00000383876 138 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 RNU6-639P-201ENST00000384074 107 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 Y_RNA.530-201ENST00000384587 101 ntBASIC4.7□□□□□ -1.66
DDX11Q96FC9 AL358176.2-201ENST00000425769 204 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms