Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC078974.1-201ENST00000411597 223 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 RN7SL432P-201ENST00000484057 298 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 RPS29P20-201ENST00000489592 171 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 RNU1-103P-201ENST00000516502 125 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AC007151.1-201ENST00000572774 483 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 OR1M4P-201ENST00000589199 287 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 RPL23AP88-201ENST00000605759 454 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 AL161734.1-201ENST00000609720 557 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 MIR7515-201ENST00000637837 67 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PTP4A1Q93096 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PTP4A1Q93096 MTCO1P12-201ENST00000414273 1543 ntBASIC2.87□□□□□ -1.95
PTP4A1Q93096 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.87□□□□□ -1.95
PTP4A1Q93096 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PTP4A1Q93096 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PTP4A1Q93096 SET-203ENST00000372688 801 ntTSL 2 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 RNU6-1083P-201ENST00000384022 107 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 SNORA46-201ENST00000384762 135 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 MIR490-201ENST00000384865 128 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AL513475.1-201ENST00000406602 315 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 BX323014.1-201ENST00000412876 237 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 HSFY4P-201ENST00000415994 1181 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 XKRYP1-201ENST00000423438 492 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AL353777.1-201ENST00000425552 326 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 ISCA1P1-201ENST00000426679 387 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC005300.1-201ENST00000428401 373 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC097713.2-201ENST00000430199 356 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AL159987.2-201ENST00000432754 307 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 XKRYP2-201ENST00000432915 492 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC093156.1-201ENST00000440382 670 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 RPS27AP10-201ENST00000496103 208 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 HSPE1P23-201ENST00000509838 286 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 SNORA31.3-201ENST00000516029 96 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 RNA5SP76-201ENST00000516277 87 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC007954.1-201ENST00000554198 494 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 RPL21P12-201ENST00000559810 515 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 MIR4429-201ENST00000580105 73 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 MIR2682-201ENST00000580305 110 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 MIR4276-201ENST00000584832 70 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AL449363.1-201ENST00000617815 186 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC010149.2-201ENST00000637608 315 ntBASIC2.86□□□□□ -1.95
PTP4A1Q93096 AC010329.5-201ENST00000623497 2174 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC104454.1-201ENST00000421341 1401 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AL137003.2-201ENST00000606924 2538 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 RNU6-778P-201ENST00000363269 103 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 RNU1-33P-201ENST00000364249 162 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 RNU6-660P-201ENST00000364566 109 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTP4A1Q93096 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 MIR183-201ENST00000384958 110 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 MIR670-201ENST00000390142 98 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 RNU6-817P-201ENST00000391083 104 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AL357075.1-201ENST00000404107 726 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 AL008629.1-201ENST00000438615 184 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 NEFMP1-201ENST00000443423 1006 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 RPL39P40-201ENST00000445481 146 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 PRDX3P3-201ENST00000447765 522 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 DPPA3P1-201ENST00000448050 469 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 MTATP6P7-201ENST00000453315 681 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 FABP5P15-201ENST00000453566 214 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.85□□□□□ -1.95
PTP4A1Q93096 OR2A20P-203ENST00000498397 1268 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 AC112204.1-201ENST00000502591 103 ntBASIC2.85□□□□□ -1.95
PTP4A1Q93096 RNU5F-8P-201ENST00000515941 111 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms