Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 HMGB1P9-201ENST00000429856 646 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 AL627311.1-201ENST00000431514 115 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 MYL8P-204ENST00000431574 518 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 BRK1P2-201ENST00000442875 223 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 RPS4XP13-201ENST00000483219 789 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 RNA5SP392-201ENST00000516905 112 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 RNA5SP165-201ENST00000517142 115 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 SNORA74C-1-201ENST00000580726 201 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 AL121932.1-201ENST00000605542 214 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 MIR6128-201ENST00000615528 109 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 PISRT1.1-201ENST00000616930 107 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 AC099506.2-201ENST00000623074 221 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 MIR6830-201ENST00000636015 70 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.38□□□□□ -1.55
RETREG2Q8NC44 MTND5P10-201ENST00000603719 1809 ntBASIC5.38□□□□□ -1.55
RETREG2Q8NC44 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 SNORD62.1-201ENST00000362541 86 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 Y_RNA.187-201ENST00000363918 113 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 RNU4-25P-201ENST00000410569 230 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 UBE2D3P2-201ENST00000424409 445 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 RSL24D1P6-201ENST00000426934 401 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AL512844.2-201ENST00000433990 593 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 SNRPEP9-201ENST00000436794 238 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 RPS26P2-201ENST00000440331 348 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 CECR9-201ENST00000453421 199 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AC022726.1-201ENST00000587475 207 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 BNIP3P22-201ENST00000593399 556 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AC136601.2-201ENST00000604356 474 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AL590392.1-201ENST00000604960 446 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AL356218.2-201ENST00000605264 187 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AL627309.6-201ENST00000606857 840 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 AL713922.2-201ENST00000619384 716 ntBASIC5.37□□□□□ -1.55
RETREG2Q8NC44 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.37□□□□□ -1.55
RETREG2Q8NC44 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 SNORD42.2-201ENST00000365570 69 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 RNU6-1329P-201ENST00000365664 107 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 RNU6-95P-201ENST00000384697 107 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 U3.22-201ENST00000391120 215 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 U3.30-201ENST00000391308 210 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AL022722.2-201ENST00000402519 180 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AL592291.1-201ENST00000403830 352 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 MIR548P-201ENST00000408336 84 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 Y_RNA.623-201ENST00000411128 95 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC092047.1-201ENST00000424997 240 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 RPL23AP1-201ENST00000428990 471 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AL356535.1-201ENST00000440335 398 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC108751.2-201ENST00000469993 231 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 RN7SKP289-201ENST00000517244 295 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC133555.2-201ENST00000550213 292 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AP000942.4-201ENST00000604811 241 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 AC124303.1-201ENST00000605703 360 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.36□□□□□ -1.55
RETREG2Q8NC44 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RETREG2Q8NC44 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 SNORD113.2-201ENST00000364166 89 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 MIR34A-201ENST00000385130 110 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 RPS20P14-201ENST00000412545 360 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 RPL17P36-201ENST00000420302 549 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms