Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 MIR1285-1-201ENST00000408593 84 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 RNU6-920P-201ENST00000410926 92 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 CALM1P1-201ENST00000442082 433 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AC010099.1-201ENST00000455434 375 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 RPS3AP22-201ENST00000488297 769 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 ARL2BPP4-201ENST00000506854 471 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 RNU6-319P-201ENST00000516025 108 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 MIR4452-201ENST00000583004 71 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 AL627230.6-201ENST00000611129 280 ntBASIC1.74□□□□□ -2.13
VPS8Q8N3P4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS8Q8N3P4 OR4G11P-202ENST00000642116 1414 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 U8.3-201ENST00000363321 132 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AC068050.1-201ENST00000394891 380 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 USP9YP6-201ENST00000413550 854 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AL590233.1-201ENST00000430017 456 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AC124916.1-201ENST00000444020 547 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 USP9YP34-201ENST00000453983 808 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 COL6A4P2-205ENST00000509855 506 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.73□□□□□ -2.13
VPS8Q8N3P4 SNORA4-201ENST00000584302 138 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AL050343.2-201ENST00000607338 280 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AP001486.3-201ENST00000615334 372 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 AC091895.1-201ENST00000624494 256 ntBASIC1.73□□□□□ -2.13
VPS8Q8N3P4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.73□□□□□ -2.13
VPS8Q8N3P4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
VPS8Q8N3P4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VPS8Q8N3P4 SNORA62.1-201ENST00000364287 154 ntBASIC1.72□□□□□ -2.13
VPS8Q8N3P4 SNORA16B-201ENST00000364674 135 ntBASIC1.72□□□□□ -2.13
VPS8Q8N3P4 MED6P1-201ENST00000439659 713 ntBASIC1.72□□□□□ -2.13
VPS8Q8N3P4 AC093852.1-201ENST00000503587 266 ntBASIC1.72□□□□□ -2.13
VPS8Q8N3P4 ATP5EP1-201ENST00000510257 156 ntBASIC1.72□□□□□ -2.13
VPS8Q8N3P4 NDUFA5P6-201ENST00000542110 379 ntBASIC1.72□□□□□ -2.13
VPS8Q8N3P4 MIR3616-201ENST00000584070 92 ntBASIC1.72□□□□□ -2.13
VPS8Q8N3P4 MFSD8-213ENST00000641134 1327 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AL513475.1-201ENST00000406602 315 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 RPL7L1P10-201ENST00000427790 463 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 HMGB1P26-201ENST00000452520 628 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AL121594.1-201ENST00000475906 575 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AC008885.2-201ENST00000509506 930 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 GLYCAM1-201ENST00000546596 285 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 MIR4287-201ENST00000579398 78 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AP001330.4-201ENST00000604350 154 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AC005296.1-201ENST00000616145 209 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 RMST_2.1-201ENST00000617263 136 ntBASIC1.71□□□□□ -2.14
VPS8Q8N3P4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.71□□□□□ -2.14
VPS8Q8N3P4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 TXNP7-201ENST00000406296 293 ntBASIC1.7□□□□□ -2.14
VPS8Q8N3P4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 OSTCP8-201ENST00000445117 448 ntBASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AC008526.1-201ENST00000509149 338 ntBASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AP004247.1-201ENST00000531556 1289 ntBASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AC106900.2-201ENST00000604994 317 ntBASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS8Q8N3P4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VPS8Q8N3P4 SNORD65-201ENST00000391079 73 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 RNU4-78P-201ENST00000410940 126 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 AC092745.2-202ENST00000411880 369 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 AL356867.1-201ENST00000429623 299 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 AL645638.1-201ENST00000440519 361 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 AC107398.1-201ENST00000486904 505 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 RNU7-193P-201ENST00000516723 65 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS8Q8N3P4 AC025594.3-201ENST00000613068 790 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 AC073592.7-201ENST00000623659 507 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 CCT4P2-201ENST00000233836 1548 ntBASIC1.69□□□□□ -2.14
VPS8Q8N3P4 AC091812.1-201ENST00000432235 1948 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 CR848007.1-201ENST00000442354 1699 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 SNORA68.1-201ENST00000364537 132 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS8Q8N3P4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms