Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 RPL23AP24-201ENST00000458203 385 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AC104472.2-201ENST00000469035 601 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AC090602.1-201ENST00000469695 252 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 SUMO2P6-201ENST00000505273 288 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AC096745.1-201ENST00000509945 370 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 RNU6-976P-201ENST00000516086 111 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AC087369.1-201ENST00000520775 996 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 AC025423.5-201ENST00000550230 219 ntBASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.06□□□□□ -1.6
NPAS4Q8IUM7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RNU6-310P-201ENST00000384655 107 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RNU6-1025P-201ENST00000410629 104 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RNU6-954P-201ENST00000411355 107 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AL353621.1-201ENST00000418219 243 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 ATG3P1-201ENST00000419507 911 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RPL17P36-201ENST00000420302 549 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 UBE2V1P4-201ENST00000425374 344 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 SKA2P1-201ENST00000425592 390 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 PIGFP3-201ENST00000441918 722 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AL356981.1-201ENST00000454879 684 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RPL12P25-201ENST00000455592 494 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 U8.20-201ENST00000459445 131 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 RNU6-1016P-201ENST00000516689 94 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AC084851.1-201ENST00000529105 249 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AC005344.1-201ENST00000613391 459 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 HMGB1P24-202ENST00000615653 685 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AC090132.2-201ENST00000615881 347 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 LINC00901.1-201ENST00000617252 152 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AP001029.2-203ENST00000589795 4910 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 AL359693.1-201ENST00000614959 2407 ntBASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NPAS4Q8IUM7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AL731566.1-201ENST00000620490 1937 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 MIR412-201ENST00000362142 91 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 Y_RNA.176-201ENST00000363815 109 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AL445189.1-201ENST00000405722 338 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 MIR1193-201ENST00000408109 78 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 RNA5SP129-201ENST00000410276 118 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 Y_RNA.646-201ENST00000410980 101 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 RNU6-607P-201ENST00000411283 108 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AL356387.2-201ENST00000422272 243 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 RPL7AP25-201ENST00000423357 805 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 RPL21P23-201ENST00000446654 460 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 SUMO1P2-201ENST00000452524 304 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 FABP5P15-201ENST00000453566 214 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 SNRPGP5-201ENST00000456003 220 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 RN7SL41P-201ENST00000476144 297 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 MTND3P25-201ENST00000509243 135 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AC026782.1-201ENST00000512952 449 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 RPL23AP53-201ENST00000521854 457 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 OR5D17P-201ENST00000531492 978 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AP002404.1-201ENST00000532005 451 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 TRAV28-201ENST00000557548 323 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 MYL12BP1-201ENST00000569826 507 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 MIR3939-201ENST00000582614 106 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 PISRT1.1-201ENST00000616930 107 ntBASIC5.04□□□□□ -1.6
NPAS4Q8IUM7 AL162373.1-201ENST00000620433 407 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 575.4 ms