Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB1Q86U70 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.19□□□□□ -1.9
LDB1Q86U70 NRBF2P1-201ENST00000587407 859 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 AL157817.1-201ENST00000614264 790 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 MIR7975-201ENST00000619350 68 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 AC005183.1-201ENST00000603687 1979 ntBASIC3.19□□□□□ -1.9
LDB1Q86U70 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LDB1Q86U70 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
LDB1Q86U70 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDB1Q86U70 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LDB1Q86U70 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
LDB1Q86U70 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.18□□□□□ -1.9
LDB1Q86U70 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB1Q86U70 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB1Q86U70 AC127391.1-201ENST00000411737 98 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 Z85995.1-201ENST00000415547 335 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 ELOCP4-201ENST00000420090 333 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
LDB1Q86U70 USP9YP36-201ENST00000424581 829 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 FCF1P1-201ENST00000432690 571 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC073614.1-201ENST00000438690 650 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB1Q86U70 MTCO2P18-201ENST00000457151 658 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB1Q86U70 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB1Q86U70 RPL32P34-201ENST00000486380 400 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.18□□□□□ -1.9
LDB1Q86U70 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LDB1Q86U70 RNU6-927P-201ENST00000516199 100 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 RNU6-1282P-201ENST00000516735 96 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 SNORA18.6-201ENST00000516792 115 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 RNA5SP291-201ENST00000517222 105 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 ARL2BPP2-201ENST00000550907 489 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL670379.6-201ENST00000603753 252 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL670379.11-201ENST00000604059 253 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC008162.1-201ENST00000604718 254 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL670379.1-201ENST00000604752 252 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL670379.5-201ENST00000605253 252 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL670379.12-201ENST00000605291 253 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL670379.8-201ENST00000605353 252 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL670379.7-201ENST00000605823 252 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC245008.1-201ENST00000608123 476 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC109347.2-201ENST00000610220 349 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 uc_338.25-201ENST00000613756 156 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AL133173.2-201ENST00000614270 90 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.18□□□□□ -1.9
LDB1Q86U70 AC006111.3-201ENST00000622137 383 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.18□□□□□ -1.9
LDB1Q86U70 AC073476.4-201ENST00000628409 72 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 AC110994.2-201ENST00000635481 492 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 FAM35BP-202ENST00000497389 3337 ntBASIC3.18□□□□□ -1.9
LDB1Q86U70 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.17□□□□□ -1.9
LDB1Q86U70 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
LDB1Q86U70 AL049641.1-201ENST00000441055 1948 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.17□□□□□ -1.9
LDB1Q86U70 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LDB1Q86U70 SNORD46.1-201ENST00000364139 104 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 RNY1P12-201ENST00000364251 105 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 SNORA75-201ENST00000384158 137 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 MIR325-201ENST00000385260 98 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB1Q86U70 NDUFS5P1-201ENST00000405668 289 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 RNU2-36P-201ENST00000410361 191 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 ZNF90P2-204ENST00000419323 1075 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 RAC1P6-201ENST00000423911 575 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 AC007283.2-201ENST00000424739 197 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB1Q86U70 AC244505.5-201ENST00000443639 207 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 AL136380.1-201ENST00000447970 162 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB1Q86U70 RNU6-420P-201ENST00000458780 107 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.17□□□□□ -1.9
LDB1Q86U70 RN7SL432P-201ENST00000484057 298 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 AC006445.2-201ENST00000510061 472 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 IGHV3-76-201ENST00000522465 295 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB1Q86U70 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB1Q86U70 RPS3AP4-201ENST00000555161 764 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 TRAV28-201ENST00000557548 323 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.17□□□□□ -1.9
LDB1Q86U70 AC064872.1-201ENST00000604823 1072 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 AC073657.2-201ENST00000605661 303 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 AL138880.2-201ENST00000616214 239 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 AC138932.5-201ENST00000617759 563 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 OR5H6-203ENST00000642105 978 ntBASIC3.17□□□□□ -1.9
LDB1Q86U70 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
LDB1Q86U70 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LDB1Q86U70 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms