Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC007038.2-201ENST00000608095 740 ntBASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 AC004908.2-201ENST00000609090 574 ntBASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 AC068880.5-201ENST00000624331 290 ntBASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 AC068137.3-201ENST00000639191 341 ntBASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 AC073869.6-201ENST00000640656 341 ntBASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.15□□□□□ -1.75
KRT28Q7Z3Y7 EXOC5P1-201ENST00000510543 1969 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 Y_RNA.6-201ENST00000362350 114 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 RNY4P16-201ENST00000364768 94 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 RPL23AP32-201ENST00000395315 459 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC019097.1-201ENST00000424783 735 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AL358934.1-201ENST00000432346 324 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 FTH1P1-201ENST00000437933 532 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 TPT1P14-201ENST00000448018 505 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 Y_RNA.638-201ENST00000459374 113 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC093278.1-201ENST00000494700 600 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 NIPA2P2-201ENST00000496376 1083 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC107934.1-201ENST00000522215 217 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 DEFB108A-201ENST00000530110 222 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AL035413.2-201ENST00000604801 525 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 SEPT14P19-203ENST00000633205 211 ntBASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT28Q7Z3Y7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 RN7SKP226-201ENST00000364912 300 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 RNU6-637P-201ENST00000384050 107 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 RNU6-432P-201ENST00000384196 109 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 RNU6-517P-201ENST00000384362 110 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AL645937.1-202ENST00000421799 937 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC092832.1-201ENST00000422934 400 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 RPL31P35-201ENST00000431058 377 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 Z99127.3-201ENST00000448158 395 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 SNRPGP5-201ENST00000456003 220 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC108059.3-201ENST00000456388 214 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 RBM43P1-201ENST00000476891 1081 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC126389.1-201ENST00000477436 290 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC010493.1-201ENST00000513479 292 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 SNORA70.14-201ENST00000516205 110 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 Vault.3-201ENST00000516676 95 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AP004371.1-201ENST00000525240 214 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC087883.1-201ENST00000551882 391 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC091544.4-201ENST00000555268 342 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 MIR98-201ENST00000606724 119 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 AC093908.1-201ENST00000623125 8092 ntBASIC4.13□□□□□ -1.75
KRT28Q7Z3Y7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 RNU6-1155P-201ENST00000363554 107 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 RNU5A-8P-201ENST00000364102 114 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 RNY1P12-201ENST00000364251 105 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 MIR19A-201ENST00000384878 82 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AC110754.1-201ENST00000399740 601 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 RAD23BP2-201ENST00000416003 1207 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 PIGFP2-201ENST00000421400 651 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 C8orf59P1-201ENST00000429930 303 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 FCF1P1-201ENST00000432690 571 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AC104850.1-201ENST00000435940 476 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 TIMM9P1-201ENST00000436122 256 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 RPL35AP22-201ENST00000436855 335 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AC021205.2-201ENST00000480069 347 ntBASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
KRT28Q7Z3Y7 AC091133.4-201ENST00000511142 308 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms