Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNA5SP22-201ENST00000365393 109 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 MIR559-201ENST00000385188 96 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP36-201ENST00000410197 133 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-628P-201ENST00000410675 107 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP111-201ENST00000411386 101 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RPLP0P7-201ENST00000416050 667 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RPL23AP89-201ENST00000439324 255 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 MTND1P17-201ENST00000448961 204 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AC130509.1-201ENST00000464158 433 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 DYNLL1P5-201ENST00000467158 270 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RPL7P43-201ENST00000478876 753 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 VN1R104P-201ENST00000505115 1009 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AC006499.6-201ENST00000511169 607 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP519-201ENST00000516480 119 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 TRMT10BP1-201ENST00000519377 943 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AL163153.1-201ENST00000554223 283 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AC007619.2-201ENST00000605743 379 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AL627309.6-201ENST00000606857 840 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 AC084781.2-201ENST00000615568 161 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 LINC00901.1-201ENST00000617252 152 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 PRO1804-201ENST00000623780 2050 ntBASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RUFY4Q6ZNE9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AC068254.2-201ENST00000623938 3577 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AC009812.4-201ENST00000569134 1805 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-128P-201ENST00000383976 107 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 Y_RNA.482-201ENST00000384377 111 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-14P-201ENST00000384630 106 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 SNORA16.2-201ENST00000390991 127 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 ATG3P1-201ENST00000419507 911 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL157831.1-201ENST00000426134 473 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 MTATP6P4-201ENST00000427725 675 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL132765.1-201ENST00000434165 553 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL162388.1-201ENST00000450912 352 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 NIPA2P5-201ENST00000452282 464 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 Y_RNA.631-201ENST00000459607 101 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 RPL37P6-201ENST00000460682 294 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 RN7SL604P-201ENST00000492589 296 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 RN7SKP24-201ENST00000515888 284 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 SNORA14.1-201ENST00000516113 141 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 IGLV3-26-201ENST00000520756 302 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AP005639.2-201ENST00000527592 928 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 CYCSP27-201ENST00000527643 293 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 XIAPP1-201ENST00000603162 600 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL158032.1-201ENST00000605401 106 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL021997.2-201ENST00000615674 271 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AC015967.1-201ENST00000619893 476 ntBASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.79□□□□□ -1.64
RUFY4Q6ZNE9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 RN7SKP280-201ENST00000364196 304 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-593P-201ENST00000364716 112 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 SNORD116-11-201ENST00000383882 92 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 RNU6-1074P-201ENST00000383995 104 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 MIR450B-201ENST00000401182 78 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AL139397.2-201ENST00000404529 772 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 RNA5SP104-201ENST00000410989 118 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 HMGB1P27-201ENST00000431429 603 ntBASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.78□□□□□ -1.64
RUFY4Q6ZNE9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms