Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC006927.3-201ENST00000638789 384 ntBASIC3.26□□□□□ -1.89
CTR9Q6PD62 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTR9Q6PD62 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTR9Q6PD62 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.26□□□□□ -1.89
CTR9Q6PD62 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.25□□□□□ -1.89
CTR9Q6PD62 RPL9P7-201ENST00000330965 580 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 RNY3P9-201ENST00000384727 106 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 MIR9-1-201ENST00000385198 89 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CTR9Q6PD62 RNU6-882P-201ENST00000391025 103 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 FO393413.1-201ENST00000402892 195 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AL590004.2-201ENST00000404787 371 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 RNA5SP184-201ENST00000411071 108 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.25□□□□□ -1.89
CTR9Q6PD62 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.25□□□□□ -1.89
CTR9Q6PD62 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.25□□□□□ -1.89
CTR9Q6PD62 AC112220.1-201ENST00000434628 355 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.25□□□□□ -1.89
CTR9Q6PD62 AL109933.2-201ENST00000452651 260 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 ZNF114P1-201ENST00000453500 292 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AP000705.1-201ENST00000454567 350 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 snoU13.4-201ENST00000458916 104 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 BET1P1-201ENST00000482276 359 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 RPF2P2-201ENST00000504693 896 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 SEM1P1-201ENST00000506694 209 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.25□□□□□ -1.89
CTR9Q6PD62 MIR4307-201ENST00000582802 84 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 RPL12P50-201ENST00000603116 116 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AL022099.1-201ENST00000604551 712 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AL035413.2-201ENST00000604801 525 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AC005046.1-201ENST00000608515 625 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AL355810.1-201ENST00000614629 552 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
CTR9Q6PD62 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTR9Q6PD62 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CTR9Q6PD62 MIR26A1-201ENST00000362205 77 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 RNU6-799P-201ENST00000363567 107 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AL356057.3-201ENST00000402607 340 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 TPMTP3-201ENST00000411928 735 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC063976.3-201ENST00000426849 329 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC236972.1-201ENST00000433225 199 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AL512286.1-201ENST00000439244 400 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 FAM103A2P-201ENST00000444122 354 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 EPS15P1-201ENST00000448836 336 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC027673.1-201ENST00000456245 405 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 MTND3P7-201ENST00000474435 343 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC034222.1-201ENST00000494052 532 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC009901.1-201ENST00000506703 541 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 SNORA31.15-201ENST00000516771 132 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 AP000889.1-201ENST00000530968 660 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 SNRPGP16-201ENST00000533275 226 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 FAM60BP-201ENST00000578364 658 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC008088.1-201ENST00000580993 280 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 MIR3162-201ENST00000581818 82 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC011451.2-201ENST00000604303 598 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC112187.2-201ENST00000604345 283 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 OR2AS2P-201ENST00000606902 342 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CTR9Q6PD62 AC007494.3-201ENST00000624660 743 ntBASIC3.24□□□□□ -1.89
CTR9Q6PD62 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 RNU6-114P-201ENST00000384704 105 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 AL136372.1-201ENST00000403060 228 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC019097.1-201ENST00000424783 735 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 AL365184.2-201ENST00000431139 435 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 OR4K11P-201ENST00000431829 904 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 THAP5P1-201ENST00000439089 262 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 RAC1P7-201ENST00000445367 377 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 UBE2DNL-203ENST00000474922 222 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC091489.2-201ENST00000566263 604 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC002064.3-201ENST00000623448 346 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 AC068057.2-201ENST00000624047 895 ntBASIC3.23□□□□□ -1.89
CTR9Q6PD62 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.23□□□□□ -1.89
CTR9Q6PD62 CCT4P2-201ENST00000233836 1548 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms