Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1Q5Y7H0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 Y_RNA.307-201ENST00000365022 117 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 Y_RNA.556-201ENST00000384677 113 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 SNORA68.2-201ENST00000391263 128 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 MIR937-201ENST00000401271 86 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL592291.1-201ENST00000403830 352 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 RPS16P5-201ENST00000406501 404 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC119751.6-201ENST00000416712 186 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC079780.1-201ENST00000428259 207 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL353997.1-201ENST00000432936 108 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 CHEK2P4-201ENST00000450340 246 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC112492.4-201ENST00000456549 352 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 SUMO2P6-201ENST00000505273 288 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 Y_RNA.668-201ENST00000516233 93 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-388P-201ENST00000517012 105 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-389P-201ENST00000517048 105 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC131281.1-201ENST00000522984 164 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC093227.2-201ENST00000589357 285 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL160281.1-201ENST00000605307 311 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC107871.2-201ENST00000612894 502 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC005344.1-201ENST00000613391 459 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 Z99571.1-201ENST00000636677 394 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL731566.1-201ENST00000620490 1937 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.32□□□□□ -1.72
HLA-DQA1Q5Y7H0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 DHX9P1-201ENST00000436565 3076 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC009812.4-201ENST00000569134 1805 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 UBE2L2-201ENST00000254302 429 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 Y_RNA.106-201ENST00000363189 100 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 Y_RNA.210-201ENST00000364161 110 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-356P-201ENST00000384140 107 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU2-3P-201ENST00000410144 191 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-847P-201ENST00000411115 108 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNU6-607P-201ENST00000411283 108 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL030996.1-201ENST00000411430 235 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 RPL37P18-201ENST00000411602 243 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 UBE2D3P2-201ENST00000424409 445 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL592045.1-201ENST00000429867 352 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL133396.1-201ENST00000432048 687 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 RPS26P2-201ENST00000440331 348 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 DYNLT3P2-201ENST00000442517 295 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 RANP8-201ENST00000444720 713 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 TDGF1P1-201ENST00000445734 527 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC010326.1-201ENST00000462726 602 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC011005.2-201ENST00000487324 359 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC104564.1-201ENST00000493028 407 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 HMGN2P28-201ENST00000606102 262 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC062037.2-201ENST00000610137 73 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC034102.8-201ENST00000615146 484 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC099669.2-201ENST00000616549 437 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 AC092435.4-201ENST00000623012 4159 ntBASIC4.31□□□□□ -1.72
HLA-DQA1Q5Y7H0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1Q5Y7H0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1Q5Y7H0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DQA1Q5Y7H0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DQA1Q5Y7H0 RNY3P11-201ENST00000364153 102 ntBASIC4.3□□□□□ -1.72
HLA-DQA1Q5Y7H0 Y_RNA.396-201ENST00000383949 103 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms