Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 KATNBL1P1-201ENST00000605192 748 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AL442644.1-201ENST00000454390 3105 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 RNU6-1181P-201ENST00000384191 106 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 UBE2V1P9-201ENST00000414760 368 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 RPS29P8-201ENST00000445109 171 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 MIR548AX-201ENST00000580117 73 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC073569.3-201ENST00000619055 682 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC012321.1-201ENST00000561622 1588 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 SNRPGP13-201ENST00000442212 177 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AL139344.1-201ENST00000605228 195 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC090116.1-201ENST00000615679 446 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AL391516.1-201ENST00000554380 2449 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 Y_RNA.185-201ENST00000363894 100 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 RNA5SP181-201ENST00000410246 98 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC008850.1-201ENST00000427546 362 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC098591.2-201ENST00000510152 315 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.68□□□□□ -2.3
UBR4Q5T4S7 AC073348.1-201ENST00000623002 331 ntBASIC0.68□□□□□ -2.3
UBR4Q5T4S7 MTCO1P23-201ENST00000415223 1526 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 RNA5SP276-201ENST00000362580 94 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 Y_RNA.568-201ENST00000384742 113 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 RPL19P1-201ENST00000411635 428 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AC009127.3-201ENST00000570531 403 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AC006270.2-201ENST00000578523 652 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 MIR4493-201ENST00000584016 73 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 MIR101-1-201ENST00000362265 75 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AL161722.3-201ENST00000605789 2983 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 Y_RNA.346-201ENST00000365385 112 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 MIR532-201ENST00000385025 91 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AL355615.1-201ENST00000406187 641 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AC002524.1-201ENST00000411687 547 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 Z85995.1-201ENST00000415547 335 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AC138627.2-201ENST00000624202 601 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 HSPD1P16-201ENST00000402302 394 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 RWDD4P2-201ENST00000426392 563 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 ARF4P2-201ENST00000430209 526 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 RWDD4P1-201ENST00000488019 565 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR4Q5T4S7 HMGN2P47-201ENST00000559378 272 ntBASIC0.67□□□□□ -2.3
UBR4Q5T4S7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 WARS2P1-201ENST00000429678 537 ntBASIC0.66□□□□□ -2.3
UBR4Q5T4S7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 RNA5SP402-201ENST00000517148 110 ntBASIC0.66□□□□□ -2.3
UBR4Q5T4S7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.66□□□□□ -2.3
UBR4Q5T4S7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 SNORD6-201ENST00000365444 73 ntBASIC0.66□□□□□ -2.3
UBR4Q5T4S7 MIR758-201ENST00000390227 88 ntBASIC0.66□□□□□ -2.3
UBR4Q5T4S7 RPL37P21-201ENST00000435890 276 ntBASIC0.66□□□□□ -2.3
UBR4Q5T4S7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.66□□□□□ -2.3
UBR4Q5T4S7 AC097655.1-201ENST00000635075 318 ntBASIC0.66□□□□□ -2.3
UBR4Q5T4S7 RNU6-328P-201ENST00000390887 106 ntBASIC0.65□□□□□ -2.3
UBR4Q5T4S7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.65□□□□□ -2.3
UBR4Q5T4S7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC0.65□□□□□ -2.3
UBR4Q5T4S7 SNORA31.16-201ENST00000516773 139 ntBASIC0.65□□□□□ -2.3
UBR4Q5T4S7 AC118942.1-201ENST00000529674 1035 ntBASIC0.65□□□□□ -2.3
UBR4Q5T4S7 MIRLET7G-201ENST00000362280 84 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 RNU6-923P-201ENST00000364753 107 ntBASIC0.65□□□□□ -2.31
UBR4Q5T4S7 HMGB1P17-201ENST00000403495 628 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms