Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 MFSD8-239ENST00000641590 2479 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VARS2Q5ST30 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 PWAR1-201ENST00000624188 2414 ntBASIC6.07□□□□□ -1.44
VARS2Q5ST30 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
VARS2Q5ST30 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VARS2Q5ST30 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARS2Q5ST30 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARS2Q5ST30 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARS2Q5ST30 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARS2Q5ST30 Y_RNA.33-201ENST00000362591 102 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 SNORD1C-201ENST00000363315 78 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 RNU6-142P-201ENST00000384019 107 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 Y_RNA.572-201ENST00000384757 98 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 MIR130A-201ENST00000385274 89 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 MIR888-201ENST00000401186 77 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 RN7SKP125-201ENST00000410481 302 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 AL772161.1-201ENST00000439130 476 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 EEF1A1P1-201ENST00000447052 739 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 RPS23P2-201ENST00000463671 415 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 TRBV5-2-201ENST00000489095 273 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 AL357075.2-201ENST00000614906 189 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 AC013791.1-201ENST00000616619 62 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 AL445567.2-201ENST00000618935 498 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARS2Q5ST30 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARS2Q5ST30 AC022164.1-201ENST00000568767 2673 ntBASIC6.06□□□□□ -1.44
VARS2Q5ST30 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARS2Q5ST30 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
VARS2Q5ST30 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 RNA5SP52-201ENST00000362448 134 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 RNU1-59P-201ENST00000364829 162 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 RNU6-756P-201ENST00000383997 107 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 RNU6-356P-201ENST00000384140 107 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 AL592291.1-201ENST00000403830 352 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 RAB9AP3-201ENST00000412737 573 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 RPL12P3-201ENST00000440080 396 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 RAB9AP1-201ENST00000449393 573 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 AF186996.7-201ENST00000492781 209 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 GSTP1P1-201ENST00000548078 319 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 MRPS21P7-201ENST00000566937 238 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 Mico1.1-201ENST00000611698 204 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 U1.25-201ENST00000614085 162 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 RPSAP73-201ENST00000614820 330 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 AL391261.4-201ENST00000616012 481 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
VARS2Q5ST30 AC092070.2-203ENST00000598377 3644 ntBASIC6.05□□□□□ -1.44
VARS2Q5ST30 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.05□□□□□ -1.44
VARS2Q5ST30 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VARS2Q5ST30 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 MIR412-201ENST00000362142 91 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 RNU6-228P-201ENST00000362700 106 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 RNU6-942P-201ENST00000363002 107 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 Y_RNA.114-201ENST00000363265 113 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 SNORD14B-201ENST00000364533 90 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 RNU6-336P-201ENST00000364891 107 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 RNU6-1074P-201ENST00000383995 104 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 AC100832.1-201ENST00000471945 383 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 RN7SL547P-201ENST00000490793 290 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 AC093815.1-201ENST00000508637 280 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 RNU6-412P-201ENST00000516434 106 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 IGLVIV-53-201ENST00000520107 367 ntBASIC6.04□□□□□ -1.44
VARS2Q5ST30 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
VARS2Q5ST30 AC234771.5-201ENST00000600161 514 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms