Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 U3.13-201ENST00000364804 214 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 RNU6-937P-201ENST00000384325 106 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 RNU6-790P-201ENST00000384479 105 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 ENSAP1-201ENST00000392855 326 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 RN7SKP114-201ENST00000410327 279 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 RPL31P2-201ENST00000413849 377 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.67□□□□□ -1.5
NFX1Q12986 AL390729.2-201ENST00000416137 156 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.67□□□□□ -1.5
NFX1Q12986 DDX39BP1-205ENST00000422507 192 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 RPL7AP49-201ENST00000429522 581 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AL591438.1-201ENST00000433508 581 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AL512844.2-201ENST00000433990 593 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.67□□□□□ -1.5
NFX1Q12986 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.67□□□□□ -1.5
NFX1Q12986 AC090804.1-201ENST00000448870 490 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 RPS4XP22-201ENST00000480755 780 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.67□□□□□ -1.5
NFX1Q12986 RN7SL244P-201ENST00000493405 297 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.67□□□□□ -1.5
NFX1Q12986 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.67□□□□□ -1.5
NFX1Q12986 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.67□□□□□ -1.5
NFX1Q12986 RNU6-798P-201ENST00000516912 103 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 IGLVIV-53-201ENST00000520107 367 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 FAM60DP-201ENST00000524174 632 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.67□□□□□ -1.5
NFX1Q12986 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.67□□□□□ -1.5
NFX1Q12986 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.67□□□□□ -1.5
NFX1Q12986 AL442163.3-201ENST00000554110 156 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 RN7SL290P-201ENST00000578661 300 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 MIR5701-3-201ENST00000578890 82 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 MIR5701-1-201ENST00000585138 82 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AL591516.1-201ENST00000611326 274 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 MIR5701-2-201ENST00000615634 82 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 ZNF720P1-201ENST00000562403 1939 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NFX1Q12986 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NFX1Q12986 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NFX1Q12986 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NFX1Q12986 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NFX1Q12986 AP005435.3-201ENST00000531260 3198 ntBASIC5.67□□□□□ -1.5
NFX1Q12986 AL022311.1-201ENST00000623726 19416 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
NFX1Q12986 SAGE2P-201ENST00000420011 2126 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AL138713.1-201ENST00000624026 2130 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NFX1Q12986 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
NFX1Q12986 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NFX1Q12986 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NFX1Q12986 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NFX1Q12986 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
NFX1Q12986 Y_RNA.234-201ENST00000364409 97 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 RNU5E-6P-201ENST00000365574 115 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.66□□□□□ -1.5
NFX1Q12986 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.66□□□□□ -1.5
NFX1Q12986 BX276092.4-201ENST00000452056 248 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC108161.1-201ENST00000461060 402 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC022034.3-201ENST00000471393 478 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 RPL23AP65-201ENST00000475608 468 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AP000926.1-201ENST00000479573 241 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC021382.1-201ENST00000483523 359 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC007686.1-201ENST00000488511 463 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.66□□□□□ -1.5
NFX1Q12986 AC005798.1-201ENST00000513715 387 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 SNORA25.12-201ENST00000516202 82 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC069113.1-201ENST00000517763 267 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC120057.2-201ENST00000571520 271 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.66□□□□□ -1.5
NFX1Q12986 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.66□□□□□ -1.5
NFX1Q12986 AC008814.1-201ENST00000603797 406 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 AC073349.3-201ENST00000617616 186 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 SAGE4P-201ENST00000442271 3381 ntBASIC5.66□□□□□ -1.5
NFX1Q12986 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NFX1Q12986 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NFX1Q12986 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NFX1Q12986 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.66□□□□□ -1.5
NFX1Q12986 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NFX1Q12986 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NFX1Q12986 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NFX1Q12986 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NFX1Q12986 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
NFX1Q12986 AC015813.6-201ENST00000624409 5808 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.65□□□□□ -1.5
NFX1Q12986 AC093671.1-201ENST00000624981 2929 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NFX1Q12986 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NFX1Q12986 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.65□□□□□ -1.5
NFX1Q12986 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.65□□□□□ -1.5
NFX1Q12986 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NFX1Q12986 RNVU1-3-201ENST00000364313 161 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 SNORA20-201ENST00000384662 132 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
NFX1Q12986 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.65□□□□□ -1.5
NFX1Q12986 AL079342.1-201ENST00000401460 267 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 COX6B1P1-201ENST00000415962 213 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 RPS15AP6-201ENST00000420703 385 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 AL358176.3-201ENST00000420757 454 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 OR2AM1P-201ENST00000422137 422 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 RAC1P7-201ENST00000445367 377 ntBASIC5.65□□□□□ -1.5
NFX1Q12986 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms