Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL591212.2-201ENST00000433923 257 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 TBCAP1-201ENST00000436520 327 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 PRDX3P3-201ENST00000447765 522 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 SCARNA18-201ENST00000459004 134 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 RNU6-329P-201ENST00000459618 107 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.62□□□□□ -1.67
SSRP1Q08945 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.62□□□□□ -1.67
SSRP1Q08945 RNU6-927P-201ENST00000516199 100 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 RNU6-1073P-201ENST00000517182 106 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 GLYCAM1-201ENST00000546596 285 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.62□□□□□ -1.67
SSRP1Q08945 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.62□□□□□ -1.67
SSRP1Q08945 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.62□□□□□ -1.67
SSRP1Q08945 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.62□□□□□ -1.67
SSRP1Q08945 MIR3921-201ENST00000577308 85 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 AC243960.4-201ENST00000600532 288 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.62□□□□□ -1.67
SSRP1Q08945 AL132765.2-201ENST00000610812 351 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 AC112200.1-201ENST00000625015 234 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 TPTEP1-208ENST00000636884 213 ntBASIC4.62□□□□□ -1.67
SSRP1Q08945 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.62□□□□□ -1.67
SSRP1Q08945 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSRP1Q08945 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.62□□□□□ -1.67
SSRP1Q08945 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.61□□□□□ -1.67
SSRP1Q08945 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSRP1Q08945 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.61□□□□□ -1.67
SSRP1Q08945 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.61□□□□□ -1.67
SSRP1Q08945 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSRP1Q08945 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSRP1Q08945 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSRP1Q08945 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SSRP1Q08945 Y_RNA.813-201ENST00000364639 102 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AL122016.1-201ENST00000403365 367 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 RNA5SP317-201ENST00000410176 116 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 RNA5SP311-201ENST00000411290 116 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.61□□□□□ -1.67
SSRP1Q08945 AC080125.1-201ENST00000414888 684 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 NDUFB4P5-201ENST00000415445 361 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 NCOR1P3-201ENST00000420479 303 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 HSPE1P1-201ENST00000421494 318 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AL691449.1-201ENST00000426570 421 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.61□□□□□ -1.67
SSRP1Q08945 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.61□□□□□ -1.67
SSRP1Q08945 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.61□□□□□ -1.67
SSRP1Q08945 RPS15AP27-201ENST00000449183 343 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AL132838.2-201ENST00000492041 314 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC103851.1-201ENST00000506833 274 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.61□□□□□ -1.67
SSRP1Q08945 RNA5SP315-201ENST00000516340 116 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 RNA5SP312-201ENST00000517068 116 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC105029.1-201ENST00000520250 669 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.61□□□□□ -1.67
SSRP1Q08945 AC011611.1-201ENST00000552179 197 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 SCOCP1-201ENST00000554676 349 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC106782.4-201ENST00000568264 210 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC005498.1-201ENST00000592125 465 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC022893.3-201ENST00000607665 437 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC009570.1-201ENST00000609599 745 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.61□□□□□ -1.67
SSRP1Q08945 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.61□□□□□ -1.67
SSRP1Q08945 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SSRP1Q08945 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSRP1Q08945 AC121333.1-201ENST00000567488 2709 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 AC068254.2-201ENST00000623938 3577 ntBASIC4.61□□□□□ -1.67
SSRP1Q08945 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.61□□□□□ -1.67
SSRP1Q08945 OR4G2P-202ENST00000641004 1759 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SSRP1Q08945 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.6□□□□□ -1.67
SSRP1Q08945 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SSRP1Q08945 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSRP1Q08945 RNU6-831P-201ENST00000384548 107 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 Y_RNA.535-201ENST00000384612 99 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 RPL21P65-201ENST00000406094 466 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 USP9YP20-201ENST00000419224 558 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.6□□□□□ -1.67
SSRP1Q08945 RSL24D1P6-201ENST00000426934 401 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AL591704.1-201ENST00000432574 275 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.6□□□□□ -1.67
SSRP1Q08945 HMGB1P37-201ENST00000439613 609 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 PRPS1P1-201ENST00000445305 876 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.6□□□□□ -1.67
SSRP1Q08945 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.6□□□□□ -1.67
SSRP1Q08945 AL645939.1-201ENST00000453429 797 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AP000873.1-201ENST00000463987 400 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.6□□□□□ -1.67
SSRP1Q08945 Y_RNA.675-201ENST00000516389 149 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 RNA5SP179-201ENST00000517284 121 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.6□□□□□ -1.67
SSRP1Q08945 OR11H5P-201ENST00000554039 926 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.6□□□□□ -1.67
SSRP1Q08945 BNIP3P25-201ENST00000596023 559 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AL356055.1-201ENST00000602528 446 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AL139395.1-201ENST00000603662 160 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AC091167.4-201ENST00000605079 184 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.6□□□□□ -1.67
SSRP1Q08945 RMST_7.1-201ENST00000621935 268 ntBASIC4.6□□□□□ -1.67
SSRP1Q08945 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSRP1Q08945 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SSRP1Q08945 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms