Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.39□□□□□ -1.87
CFHR3Q02985 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.39□□□□□ -1.87
CFHR3Q02985 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.39□□□□□ -1.87
CFHR3Q02985 RNU6-1069P-201ENST00000516612 133 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 RN7SKP289-201ENST00000517244 295 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.39□□□□□ -1.87
CFHR3Q02985 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.39□□□□□ -1.87
CFHR3Q02985 AL352979.3-201ENST00000553515 247 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.39□□□□□ -1.87
CFHR3Q02985 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.39□□□□□ -1.87
CFHR3Q02985 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.39□□□□□ -1.87
CFHR3Q02985 MIR4790-201ENST00000577799 79 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 MIR548AC-201ENST00000585049 88 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 MIR3138-201ENST00000585238 82 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 POLR3GP2-201ENST00000588366 668 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC073539.2-201ENST00000597113 165 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AL670379.10-201ENST00000604330 253 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC245389.1-201ENST00000605141 529 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AL670379.9-201ENST00000605428 253 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC091979.2-201ENST00000607514 214 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 AC007742.2-201ENST00000618226 398 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 SNORD39.4-201ENST00000620099 78 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 MTND1P37-201ENST00000636562 264 ntBASIC3.39□□□□□ -1.87
CFHR3Q02985 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CFHR3Q02985 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CFHR3Q02985 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.39□□□□□ -1.87
CFHR3Q02985 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.39□□□□□ -1.87
CFHR3Q02985 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.38□□□□□ -1.87
CFHR3Q02985 AC008568.2-201ENST00000623862 2313 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CFHR3Q02985 AL158163.1-201ENST00000603915 1649 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 RN7SKP44-201ENST00000363602 316 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 RNA5SP175-201ENST00000364275 119 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 Y_RNA.245-201ENST00000364493 95 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 Y_RNA.339-201ENST00000365325 102 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 MIR301A-201ENST00000385261 86 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 MIR548K-201ENST00000408406 116 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 RNA5SP129-201ENST00000410276 118 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 RNU2-71P-201ENST00000411395 189 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 RPL23AP26-201ENST00000412728 464 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AL157831.1-201ENST00000426134 473 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 AL590383.1-201ENST00000428602 75 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 GPM6BP2-201ENST00000432046 144 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AC073063.1-201ENST00000434352 607 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 PIGFP3-201ENST00000441918 722 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AC007677.1-201ENST00000445757 515 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 GPM6BP1-201ENST00000446387 144 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AL360271.2-201ENST00000447710 161 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 TPT1P12-201ENST00000448968 492 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AC107399.1-201ENST00000451226 265 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AC091167.1-201ENST00000492017 396 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 AC083829.1-201ENST00000503756 657 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 MTND3P25-201ENST00000509243 135 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AC002456.2-201ENST00000509356 380 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AC008958.1-201ENST00000511047 682 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 RNA5SP290-201ENST00000517133 127 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 RNA5SP454-201ENST00000517231 127 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 RNU6-323P-201ENST00000521915 107 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 ATP5F1P5-201ENST00000526403 760 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.38□□□□□ -1.87
CFHR3Q02985 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.38□□□□□ -1.87
CFHR3Q02985 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 MIR3690-201ENST00000580266 75 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AC023575.1-201ENST00000580510 358 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 APOOP1-201ENST00000604695 592 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.38□□□□□ -1.87
CFHR3Q02985 AC016727.1-205ENST00000605437 569 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 FAM27D1-201ENST00000612308 341 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 MIR6716-201ENST00000613413 80 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 AL160413.1-201ENST00000622780 310 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 MIR3653-201ENST00000625572 110 ntBASIC3.38□□□□□ -1.87
CFHR3Q02985 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CFHR3Q02985 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.38□□□□□ -1.87
CFHR3Q02985 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CFHR3Q02985 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.38□□□□□ -1.87
CFHR3Q02985 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CFHR3Q02985 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CFHR3Q02985 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CFHR3Q02985 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CFHR3Q02985 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CFHR3Q02985 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.37□□□□□ -1.87
CFHR3Q02985 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.37□□□□□ -1.87
CFHR3Q02985 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CFHR3Q02985 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.37□□□□□ -1.87
CFHR3Q02985 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CFHR3Q02985 RNU6-50P-201ENST00000362356 103 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms