Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL133173.2-201ENST00000614270 90 ntBASIC3.16□□□□□ -1.9
CDK3Q00526 AC068831.7-201ENST00000616954 363 ntBASIC3.16□□□□□ -1.9
CDK3Q00526 PISRT1-201ENST00000626175 531 ntBASIC3.16□□□□□ -1.9
CDK3Q00526 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDK3Q00526 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.16□□□□□ -1.9
CDK3Q00526 AC007496.3-201ENST00000624987 3443 ntBASIC3.16□□□□□ -1.9
CDK3Q00526 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CDK3Q00526 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
CDK3Q00526 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDK3Q00526 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDK3Q00526 FARSBP1-201ENST00000435808 1778 ntBASIC3.15□□□□□ -1.9
CDK3Q00526 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CDK3Q00526 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.15□□□□□ -1.9
CDK3Q00526 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDK3Q00526 U3.11-201ENST00000364476 212 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 Y_RNA.359-201ENST00000365498 102 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AP002088.1-201ENST00000382740 395 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 RNU6-348P-201ENST00000384386 107 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 RPS3AP36-201ENST00000398190 775 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AC007899.1-201ENST00000412776 775 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 HMGB3P23-201ENST00000414981 585 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 ELOCP4-201ENST00000420090 333 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AC091390.3-201ENST00000426478 338 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AC137499.1-201ENST00000427602 88 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 ARF4P2-201ENST00000430209 526 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK3Q00526 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK3Q00526 AC009961.2-201ENST00000435771 251 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 SNRPEP4-201ENST00000435815 279 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AC104850.1-201ENST00000435940 476 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AC073614.1-201ENST00000438690 650 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AL031667.1-201ENST00000440222 725 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 CYCSP32-201ENST00000440548 321 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK3Q00526 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK3Q00526 AC020550.1-201ENST00000447385 163 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.15□□□□□ -1.91
CDK3Q00526 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK3Q00526 MTCO2P29-201ENST00000465212 189 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 RBM43P1-201ENST00000476891 1081 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK3Q00526 AC079140.3-201ENST00000511111 550 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK3Q00526 CASP1P1-201ENST00000526345 212 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AC011979.2-201ENST00000527568 352 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 ARL2BPP2-201ENST00000550907 489 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK3Q00526 MIR3186-201ENST00000577404 85 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK3Q00526 DPPA3P3-201ENST00000603842 430 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 AL451064.1-201ENST00000607718 471 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK3Q00526 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
CDK3Q00526 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.15□□□□□ -1.91
CDK3Q00526 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK3Q00526 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDK3Q00526 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CDK3Q00526 RNU6-511P-201ENST00000363496 107 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK3Q00526 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 RNU6-328P-201ENST00000390887 106 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDK3Q00526 EI24P2-201ENST00000397776 1076 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 RNU2-36P-201ENST00000410361 191 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 CDK8P2-201ENST00000415020 547 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 C1DP2-201ENST00000418167 426 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 RPS15AP6-201ENST00000420703 385 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDK3Q00526 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK3Q00526 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.14□□□□□ -1.91
CDK3Q00526 ARPC3P1-201ENST00000437218 533 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 CBWD4P-201ENST00000445695 655 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 AL671855.1-201ENST00000446875 1203 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK3Q00526 MTCO2P18-201ENST00000457151 658 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK3Q00526 RPL30P5-201ENST00000494923 336 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.14□□□□□ -1.91
CDK3Q00526 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDK3Q00526 RNU2-10P-201ENST00000516375 211 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.14□□□□□ -1.91
CDK3Q00526 NDUFB9P3-201ENST00000521269 501 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 AC024909.2-201ENST00000553035 286 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.14□□□□□ -1.91
CDK3Q00526 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK3Q00526 MIR4528-201ENST00000577763 90 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK3Q00526 AC098614.4-201ENST00000607601 462 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 AC100793.4-201ENST00000613683 429 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 AC009509.4-201ENST00000619202 509 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDK3Q00526 AL136164.4-201ENST00000625013 2135 ntBASIC3.14□□□□□ -1.91
CDK3Q00526 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms