Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
CBX1P83916 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.6□□□□□ -1.99
CBX1P83916 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CBX1P83916 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.6□□□□□ -1.99
CBX1P83916 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.6□□□□□ -1.99
CBX1P83916 OR1M4P-201ENST00000589199 287 ntBASIC2.6□□□□□ -1.99
CBX1P83916 MTND4LP5-201ENST00000605152 292 ntBASIC2.6□□□□□ -1.99
CBX1P83916 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.6□□□□□ -1.99
CBX1P83916 AC010608.3-201ENST00000625048 527 ntBASIC2.6□□□□□ -1.99
CBX1P83916 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CBX1P83916 AC135776.4-201ENST00000624300 1904 ntBASIC2.6□□□□□ -1.99
CBX1P83916 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CBX1P83916 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CBX1P83916 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CBX1P83916 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.59□□□□□ -1.99
CBX1P83916 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CBX1P83916 SNORA71.1-201ENST00000364523 117 ntBASIC2.59□□□□□ -1.99
CBX1P83916 RNU6-1242P-201ENST00000391052 103 ntBASIC2.59□□□□□ -1.99
CBX1P83916 MIR888-201ENST00000401186 77 ntBASIC2.59□□□□□ -1.99
CBX1P83916 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CBX1P83916 RN7SKP266-201ENST00000410232 287 ntBASIC2.59□□□□□ -1.99
CBX1P83916 RNA5SP120-201ENST00000410900 112 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.59□□□□□ -1.99
CBX1P83916 TXNL1P1-201ENST00000429528 554 ntBASIC2.59□□□□□ -1.99
CBX1P83916 RBM43P1-201ENST00000476891 1081 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AL160314.1-201ENST00000490836 438 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AC090255.1-201ENST00000495779 349 ntBASIC2.59□□□□□ -1.99
CBX1P83916 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.59□□□□□ -1.99
CBX1P83916 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.59□□□□□ -1.99
CBX1P83916 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.59□□□□□ -1.99
CBX1P83916 MTATP6P9-201ENST00000515039 680 ntBASIC2.59□□□□□ -1.99
CBX1P83916 RNU6-390P-201ENST00000516259 103 ntBASIC2.59□□□□□ -1.99
CBX1P83916 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.59□□□□□ -1.99
CBX1P83916 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CBX1P83916 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.59□□□□□ -1.99
CBX1P83916 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.59□□□□□ -1.99
CBX1P83916 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
CBX1P83916 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.59□□□□□ -1.99
CBX1P83916 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.59□□□□□ -1.99
CBX1P83916 VN1R92P-201ENST00000598511 928 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AL592221.1-201ENST00000605266 382 ntBASIC2.59□□□□□ -1.99
CBX1P83916 RNU6-88P-201ENST00000606801 100 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AL391834.2-201ENST00000609982 546 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AC097478.2-201ENST00000610572 514 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AP000676.3-201ENST00000623299 569 ntBASIC2.59□□□□□ -1.99
CBX1P83916 AC004777.1-201ENST00000624317 287 ntBASIC2.59□□□□□ -1.99
CBX1P83916 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.59□□□□□ -1.99
CBX1P83916 AC069528.2-201ENST00000624849 1991 ntBASIC2.59□□□□□ -2
CBX1P83916 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.58□□□□□ -2
CBX1P83916 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.58□□□□□ -2
CBX1P83916 SNORA71.3-201ENST00000362582 128 ntBASIC2.58□□□□□ -2
CBX1P83916 RNU6-884P-201ENST00000363889 107 ntBASIC2.58□□□□□ -2
CBX1P83916 SNORD46.1-201ENST00000364139 104 ntBASIC2.58□□□□□ -2
CBX1P83916 SNORA4.1-201ENST00000364263 144 ntBASIC2.58□□□□□ -2
CBX1P83916 SNORA68.1-201ENST00000364537 132 ntBASIC2.58□□□□□ -2
CBX1P83916 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CBX1P83916 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CBX1P83916 AL513475.1-201ENST00000406602 315 ntBASIC2.58□□□□□ -2
CBX1P83916 CCNG1P1-201ENST00000406783 885 ntBASIC2.58□□□□□ -2
CBX1P83916 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.58□□□□□ -2
CBX1P83916 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 AC005300.1-201ENST00000428401 373 ntBASIC2.58□□□□□ -2
CBX1P83916 RPS20P5-201ENST00000434808 360 ntBASIC2.58□□□□□ -2
CBX1P83916 RSU1P2-202ENST00000437884 485 ntBASIC2.58□□□□□ -2
CBX1P83916 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.58□□□□□ -2
CBX1P83916 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 RN7SL807P-201ENST00000470923 297 ntBASIC2.58□□□□□ -2
CBX1P83916 RPS15AP34-201ENST00000487776 387 ntBASIC2.58□□□□□ -2
CBX1P83916 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
CBX1P83916 AL358832.1-201ENST00000497800 389 ntBASIC2.58□□□□□ -2
CBX1P83916 MTCYBP43-201ENST00000513621 740 ntBASIC2.58□□□□□ -2
CBX1P83916 AC008885.1-201ENST00000514930 301 ntBASIC2.58□□□□□ -2
CBX1P83916 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.58□□□□□ -2
CBX1P83916 AC009812.2-201ENST00000517657 457 ntBASIC2.58□□□□□ -2
CBX1P83916 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.58□□□□□ -2
CBX1P83916 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 MIR4448-201ENST00000584360 86 ntBASIC2.58□□□□□ -2
CBX1P83916 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.58□□□□□ -2
CBX1P83916 AL158042.1-201ENST00000605338 460 ntBASIC2.58□□□□□ -2
CBX1P83916 AC106052.1-201ENST00000608029 497 ntBASIC2.58□□□□□ -2
CBX1P83916 AC239868.4-201ENST00000608318 671 ntBASIC2.58□□□□□ -2
CBX1P83916 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.58□□□□□ -2
CBX1P83916 AL136981.2-201ENST00000617319 734 ntBASIC2.58□□□□□ -2
CBX1P83916 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.58□□□□□ -2
CBX1P83916 AC022306.3-201ENST00000619930 550 ntBASIC2.58□□□□□ -2
CBX1P83916 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CBX1P83916 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CBX1P83916 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
CBX1P83916 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
CBX1P83916 ZNF833P-201ENST00000424938 1494 ntBASIC2.58□□□□□ -2
CBX1P83916 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.58□□□□□ -2
CBX1P83916 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CBX1P83916 AC000403.1-201ENST00000613696 3585 ntBASIC2.57□□□□□ -2
CBX1P83916 SNORA63.1-201ENST00000362493 131 ntBASIC2.57□□□□□ -2
CBX1P83916 RNA5SP267-201ENST00000364893 126 ntBASIC2.57□□□□□ -2
CBX1P83916 RNU6-906P-201ENST00000384700 70 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms