Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 HIF1AP1-201ENST00000553642 175 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 AL360157.1-201ENST00000565962 87 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC009101.1-201ENST00000568135 242 ntBASIC2.85□□□□□ -1.95
LMO4P61968 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.85□□□□□ -1.95
LMO4P61968 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.85□□□□□ -1.95
LMO4P61968 AC044792.1-201ENST00000593294 196 ntBASIC2.85□□□□□ -1.95
LMO4P61968 NRBF2P5-201ENST00000603087 788 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC006557.5-201ENST00000603126 811 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AL162413.1-201ENST00000603198 110 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC012669.1-201ENST00000603209 283 ntBASIC2.85□□□□□ -1.95
LMO4P61968 BNIP3P10-201ENST00000605360 577 ntBASIC2.85□□□□□ -1.95
LMO4P61968 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.85□□□□□ -1.95
LMO4P61968 AL391813.2-201ENST00000609113 322 ntBASIC2.85□□□□□ -1.95
LMO4P61968 OR10AB1P-201ENST00000609613 938 ntBASIC2.85□□□□□ -1.95
LMO4P61968 RMST_3.1-201ENST00000611651 109 ntBASIC2.85□□□□□ -1.95
LMO4P61968 MIR486-1-201ENST00000612171 68 ntBASIC2.85□□□□□ -1.95
LMO4P61968 MIR7112-201ENST00000616126 65 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LMO4P61968 RMST_9.1-201ENST00000619945 193 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AL136221.1-201ENST00000621449 509 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AL360181.4-201ENST00000621752 134 ntBASIC2.85□□□□□ -1.95
LMO4P61968 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.85□□□□□ -1.95
LMO4P61968 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.85□□□□□ -1.95
LMO4P61968 MTND1P37-201ENST00000636562 264 ntBASIC2.85□□□□□ -1.95
LMO4P61968 AC112487.2-201ENST00000637950 304 ntBASIC2.85□□□□□ -1.95
LMO4P61968 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.85□□□□□ -1.95
LMO4P61968 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
LMO4P61968 AC097714.1-201ENST00000511272 1647 ntBASIC2.85□□□□□ -1.95
LMO4P61968 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LMO4P61968 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
LMO4P61968 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
LMO4P61968 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
LMO4P61968 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LMO4P61968 AC066616.2-201ENST00000559334 1481 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC006026.1-201ENST00000444025 1803 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AL672296.1-201ENST00000427780 2158 ntBASIC2.84□□□□□ -1.95
LMO4P61968 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LMO4P61968 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.84□□□□□ -1.95
LMO4P61968 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.84□□□□□ -1.95
LMO4P61968 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LMO4P61968 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LMO4P61968 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LMO4P61968 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
LMO4P61968 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LMO4P61968 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LMO4P61968 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LMO4P61968 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LMO4P61968 RNU6-451P-201ENST00000362921 107 ntBASIC2.84□□□□□ -1.95
LMO4P61968 Y_RNA.86-201ENST00000363020 111 ntBASIC2.84□□□□□ -1.95
LMO4P61968 RNY3P3-201ENST00000363816 102 ntBASIC2.84□□□□□ -1.95
LMO4P61968 SNORA38.1-201ENST00000364172 131 ntBASIC2.84□□□□□ -1.95
LMO4P61968 Y_RNA.481-201ENST00000384373 102 ntBASIC2.84□□□□□ -1.95
LMO4P61968 U3.19-201ENST00000390893 196 ntBASIC2.84□□□□□ -1.95
LMO4P61968 MRPL42P2-201ENST00000403169 426 ntBASIC2.84□□□□□ -1.95
LMO4P61968 RNU2-8P-201ENST00000410727 190 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.84□□□□□ -1.95
LMO4P61968 AC019097.1-201ENST00000424783 735 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AL513185.2-201ENST00000425543 193 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC091390.3-201ENST00000426478 338 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.84□□□□□ -1.95
LMO4P61968 CALM1P1-201ENST00000442082 433 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC093019.1-201ENST00000443135 252 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AL118496.2-201ENST00000448300 230 ntBASIC2.84□□□□□ -1.95
LMO4P61968 RPL7P52-201ENST00000449200 742 ntBASIC2.84□□□□□ -1.95
LMO4P61968 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.84□□□□□ -1.95
LMO4P61968 RN7SL93P-201ENST00000463035 293 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.84□□□□□ -1.95
LMO4P61968 RPL36AP51-201ENST00000487216 318 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC023194.1-201ENST00000493084 308 ntBASIC2.84□□□□□ -1.95
LMO4P61968 COX7A2P2-201ENST00000505291 250 ntBASIC2.84□□□□□ -1.95
LMO4P61968 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.84□□□□□ -1.95
LMO4P61968 SNORA70.14-201ENST00000516205 110 ntBASIC2.84□□□□□ -1.95
LMO4P61968 RNA5SP468-201ENST00000516782 93 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AP006245.1-201ENST00000522549 120 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.84□□□□□ -1.95
LMO4P61968 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LMO4P61968 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.84□□□□□ -1.95
LMO4P61968 AC026333.2-201ENST00000542164 106 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.84□□□□□ -1.95
LMO4P61968 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.84□□□□□ -1.95
LMO4P61968 AL353997.4-201ENST00000586196 166 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.84□□□□□ -1.95
LMO4P61968 AC067852.3-201ENST00000589177 561 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC025946.2-201ENST00000603398 234 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC011468.4-201ENST00000603942 409 ntBASIC2.84□□□□□ -1.95
LMO4P61968 BX664608.1-201ENST00000610519 487 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC006504.8-201ENST00000621046 635 ntBASIC2.84□□□□□ -1.95
LMO4P61968 AC024614.3-201ENST00000637860 256 ntBASIC2.84□□□□□ -1.95
LMO4P61968 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.84□□□□□ -1.95
LMO4P61968 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.84□□□□□ -1.96
LMO4P61968 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.96
LMO4P61968 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
LMO4P61968 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LMO4P61968 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LMO4P61968 AC006504.1-201ENST00000562493 3666 ntBASIC2.83□□□□□ -1.96
LMO4P61968 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms