Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL157392.4-201ENST00000609756 345 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AC245517.5-201ENST00000611529 162 ntBASIC2.29□□□□□ -2.04
VSX2P58304 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VSX2P58304 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.29□□□□□ -2.04
VSX2P58304 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.29□□□□□ -2.04
VSX2P58304 AC010680.1-201ENST00000590024 3590 ntBASIC2.29□□□□□ -2.04
VSX2P58304 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VSX2P58304 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
VSX2P58304 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
VSX2P58304 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
VSX2P58304 SNORD114-30-201ENST00000364448 72 ntBASIC2.28□□□□□ -2.04
VSX2P58304 RNU6-621P-201ENST00000364752 109 ntBASIC2.28□□□□□ -2.04
VSX2P58304 Y_RNA.311-201ENST00000365068 96 ntBASIC2.28□□□□□ -2.04
VSX2P58304 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.28□□□□□ -2.04
VSX2P58304 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
VSX2P58304 TAS2R15P-201ENST00000390674 928 ntBASIC2.28□□□□□ -2.04
VSX2P58304 RPS4XP7-201ENST00000406274 780 ntBASIC2.28□□□□□ -2.04
VSX2P58304 MTATP6P20-201ENST00000414147 562 ntBASIC2.28□□□□□ -2.04
VSX2P58304 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 Z82209.1-201ENST00000422141 2135 ntBASIC2.28□□□□□ -2.04
VSX2P58304 AC008850.1-201ENST00000427546 362 ntBASIC2.28□□□□□ -2.04
VSX2P58304 AL512844.2-201ENST00000433990 593 ntBASIC2.28□□□□□ -2.04
VSX2P58304 COX7BP2-201ENST00000437976 242 ntBASIC2.28□□□□□ -2.04
VSX2P58304 RPS12P2-201ENST00000439728 269 ntBASIC2.28□□□□□ -2.04
VSX2P58304 EEF1A1P39-201ENST00000440791 250 ntBASIC2.28□□□□□ -2.04
VSX2P58304 MEMO1P3-201ENST00000459811 302 ntBASIC2.28□□□□□ -2.04
VSX2P58304 RPL36AP51-201ENST00000487216 318 ntBASIC2.28□□□□□ -2.04
VSX2P58304 RPS27P26-201ENST00000494583 239 ntBASIC2.28□□□□□ -2.04
VSX2P58304 AC135721.1-201ENST00000497954 479 ntBASIC2.28□□□□□ -2.04
VSX2P58304 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.28□□□□□ -2.04
VSX2P58304 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.28□□□□□ -2.04
VSX2P58304 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
VSX2P58304 MTCO1P47-201ENST00000523889 1271 ntBASIC2.28□□□□□ -2.04
VSX2P58304 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VSX2P58304 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VSX2P58304 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VSX2P58304 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 AP001269.3-201ENST00000588718 329 ntBASIC2.28□□□□□ -2.04
VSX2P58304 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.28□□□□□ -2.04
VSX2P58304 AC007938.3-201ENST00000604965 623 ntBASIC2.28□□□□□ -2.04
VSX2P58304 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.28□□□□□ -2.04
VSX2P58304 AC034102.8-201ENST00000615146 484 ntBASIC2.28□□□□□ -2.04
VSX2P58304 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
VSX2P58304 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.28□□□□□ -2.04
VSX2P58304 AC010608.3-201ENST00000625048 527 ntBASIC2.28□□□□□ -2.04
VSX2P58304 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.28□□□□□ -2.04
VSX2P58304 MIR1291-201ENST00000627649 87 ntBASIC2.28□□□□□ -2.04
VSX2P58304 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.28□□□□□ -2.04
VSX2P58304 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VSX2P58304 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.28□□□□□ -2.05
VSX2P58304 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.28□□□□□ -2.05
VSX2P58304 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VSX2P58304 AL390862.1-201ENST00000635467 1469 ntBASIC2.27□□□□□ -2.05
VSX2P58304 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VSX2P58304 AL049641.1-201ENST00000441055 1948 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RNU6-97P-201ENST00000363387 104 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RNU6-1078P-201ENST00000364522 103 ntBASIC2.27□□□□□ -2.05
VSX2P58304 SNORA23-201ENST00000365128 182 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RNU6-359P-201ENST00000365466 108 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RNU6-637P-201ENST00000384050 107 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RNU6-1035P-201ENST00000384477 107 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AL356421.1-201ENST00000403255 413 ntBASIC2.27□□□□□ -2.05
VSX2P58304 Z85995.1-201ENST00000415547 335 ntBASIC2.27□□□□□ -2.05
VSX2P58304 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.27□□□□□ -2.05
VSX2P58304 AC092047.1-201ENST00000424997 240 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RPS25P9-201ENST00000435591 252 ntBASIC2.27□□□□□ -2.05
VSX2P58304 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.27□□□□□ -2.05
VSX2P58304 ARPC3P1-201ENST00000437218 533 ntBASIC2.27□□□□□ -2.05
VSX2P58304 MTCO2P20-201ENST00000437339 673 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AC009296.1-201ENST00000443146 155 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.27□□□□□ -2.05
VSX2P58304 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.27□□□□□ -2.05
VSX2P58304 MTND2P24-201ENST00000453434 806 ntBASIC2.27□□□□□ -2.05
VSX2P58304 RPL21P134-201ENST00000453468 483 ntBASIC2.27□□□□□ -2.05
VSX2P58304 ATG12P2-201ENST00000456830 416 ntBASIC2.27□□□□□ -2.05
VSX2P58304 MTND2P39-201ENST00000457230 764 ntBASIC2.27□□□□□ -2.05
VSX2P58304 snoU109.3-201ENST00000459477 145 ntBASIC2.27□□□□□ -2.05
VSX2P58304 MTND1P16-201ENST00000465177 898 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AC134050.1-201ENST00000495088 933 ntBASIC2.27□□□□□ -2.05
VSX2P58304 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.27□□□□□ -2.05
VSX2P58304 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.27□□□□□ -2.05
VSX2P58304 RNU6-1282P-201ENST00000516735 96 ntBASIC2.27□□□□□ -2.05
VSX2P58304 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
VSX2P58304 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.27□□□□□ -2.05
VSX2P58304 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.27□□□□□ -2.05
VSX2P58304 AP002748.2-201ENST00000528671 348 ntBASIC2.27□□□□□ -2.05
VSX2P58304 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.27□□□□□ -2.05
VSX2P58304 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
VSX2P58304 AC124947.2-202ENST00000552735 133 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.27□□□□□ -2.05
VSX2P58304 MYL12BP1-201ENST00000569826 507 ntBASIC2.27□□□□□ -2.05
VSX2P58304 SNORD53-201ENST00000579969 78 ntBASIC2.27□□□□□ -2.05
VSX2P58304 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms