Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 AC073308.1-201ENST00000623696 305 ntBASIC2.48□□□□□ -2.01
PKNOX1P55347 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.48□□□□□ -2.01
PKNOX1P55347 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
PKNOX1P55347 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
PKNOX1P55347 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PKNOX1P55347 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
PKNOX1P55347 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PKNOX1P55347 U8.8-201ENST00000365399 135 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 RNU6-217P-201ENST00000384164 104 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 RSL24D1P4-201ENST00000400938 484 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 RNU2-33P-201ENST00000410344 192 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.47□□□□□ -2.01
PKNOX1P55347 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.47□□□□□ -2.01
PKNOX1P55347 RPL35AP22-201ENST00000436855 335 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PKNOX1P55347 DDX3P2-201ENST00000446138 111 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 AC087588.1-201ENST00000462203 316 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 RPS15AP36-201ENST00000492022 382 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 AC080014.1-201ENST00000496877 1201 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 RPL37P25-201ENST00000507308 276 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.47□□□□□ -2.01
PKNOX1P55347 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PKNOX1P55347 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.47□□□□□ -2.01
PKNOX1P55347 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
PKNOX1P55347 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.47□□□□□ -2.01
PKNOX1P55347 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.47□□□□□ -2.01
PKNOX1P55347 AGGF1P5-201ENST00000567900 919 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 MIR4446-201ENST00000578505 67 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 ELOCP29-201ENST00000588193 334 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 AL137843.1-201ENST00000605078 385 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 AC012150.2-201ENST00000621300 544 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 MTND1P37-201ENST00000636562 264 ntBASIC2.47□□□□□ -2.01
PKNOX1P55347 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
PKNOX1P55347 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PKNOX1P55347 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PKNOX1P55347 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PKNOX1P55347 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PKNOX1P55347 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
PKNOX1P55347 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PKNOX1P55347 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.46□□□□□ -2.02
PKNOX1P55347 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PKNOX1P55347 RPL21P132-201ENST00000331267 462 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 SNORD62.1-201ENST00000362541 86 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 TXNP7-201ENST00000406296 293 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 RNU6-193P-201ENST00000410977 107 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 AL359704.1-201ENST00000411586 781 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 AL008987.1-201ENST00000415528 237 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.46□□□□□ -2.02
PKNOX1P55347 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.46□□□□□ -2.02
PKNOX1P55347 AL451062.2-201ENST00000427515 271 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 AC007919.1-201ENST00000429380 217 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.46□□□□□ -2.02
PKNOX1P55347 PIGFP3-201ENST00000441918 722 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 MTCO3P45-201ENST00000443036 613 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 FAM103A2P-201ENST00000444122 354 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.46□□□□□ -2.02
PKNOX1P55347 WASF1P1-201ENST00000447560 1131 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 RPL23AP35-201ENST00000451906 501 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.46□□□□□ -2.02
PKNOX1P55347 RPS20P22-201ENST00000473700 357 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 RNU5A-4P-201ENST00000516588 111 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 RN7SKP40-201ENST00000517211 242 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.46□□□□□ -2.02
PKNOX1P55347 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.46□□□□□ -2.02
PKNOX1P55347 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.46□□□□□ -2.02
PKNOX1P55347 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.46□□□□□ -2.02
PKNOX1P55347 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.46□□□□□ -2.02
PKNOX1P55347 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.46□□□□□ -2.02
PKNOX1P55347 AC009163.5-201ENST00000575421 637 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 MIR544B-201ENST00000582372 78 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 AC021171.1-201ENST00000603137 706 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.46□□□□□ -2.02
PKNOX1P55347 AC072039.2-201ENST00000608883 439 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 SDR42E1P2-201ENST00000614861 481 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 AL391262.2-201ENST00000622466 494 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.46□□□□□ -2.02
PKNOX1P55347 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PKNOX1P55347 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
PKNOX1P55347 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PKNOX1P55347 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PKNOX1P55347 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
PKNOX1P55347 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PKNOX1P55347 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.45□□□□□ -2.02
PKNOX1P55347 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PKNOX1P55347 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 RNU6-859P-201ENST00000362728 107 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 RNU6-769P-201ENST00000384407 104 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 MIR19A-201ENST00000384878 82 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 RNA5SP354-201ENST00000391247 136 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AL162578.1-201ENST00000406202 378 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AL513331.1-201ENST00000411908 397 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 HMGB1P49-201ENST00000418882 569 ntBASIC2.45□□□□□ -2.02
PKNOX1P55347 AC009414.1-201ENST00000427200 443 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms