Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.53□□□□□ -2
CDH4P55283 AC069431.2-201ENST00000604149 1099 ntBASIC2.53□□□□□ -2
CDH4P55283 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.53□□□□□ -2
CDH4P55283 MTND1P37-201ENST00000636562 264 ntBASIC2.53□□□□□ -2
CDH4P55283 AC099063.3-201ENST00000642066 185 ntBASIC2.53□□□□□ -2
CDH4P55283 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CDH4P55283 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.53□□□□□ -2
CDH4P55283 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH4P55283 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH4P55283 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH4P55283 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CDH4P55283 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH4P55283 RNU4-82P-201ENST00000362443 140 ntBASIC2.52□□□□□ -2.01
CDH4P55283 RNU6-432P-201ENST00000384196 109 ntBASIC2.52□□□□□ -2.01
CDH4P55283 TXNP7-201ENST00000406296 293 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH4P55283 AC009963.1-201ENST00000417265 157 ntBASIC2.52□□□□□ -2.01
CDH4P55283 MTCO2P17-201ENST00000424336 677 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC098614.2-201ENST00000426040 255 ntBASIC2.52□□□□□ -2.01
CDH4P55283 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.52□□□□□ -2.01
CDH4P55283 UBE2V1P13-201ENST00000436983 439 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH4P55283 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH4P55283 AP000705.1-201ENST00000454567 350 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC073901.1-201ENST00000462471 408 ntBASIC2.52□□□□□ -2.01
CDH4P55283 MRPS17P3-201ENST00000465453 385 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC105252.1-201ENST00000503089 286 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH4P55283 AC109445.1-201ENST00000512356 383 ntBASIC2.52□□□□□ -2.01
CDH4P55283 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH4P55283 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CDH4P55283 AC109329.2-201ENST00000519658 482 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH4P55283 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH4P55283 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH4P55283 SUB1P1-201ENST00000524415 382 ntBASIC2.52□□□□□ -2.01
CDH4P55283 COX6CP5-201ENST00000527162 228 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH4P55283 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CDH4P55283 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH4P55283 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH4P55283 AC009163.5-201ENST00000575421 637 ntBASIC2.52□□□□□ -2.01
CDH4P55283 MIR4513-201ENST00000581077 86 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AL357094.1-201ENST00000603845 844 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC008498.1-201ENST00000613012 531 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC109809.1-201ENST00000619665 545 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AC009269.6-201ENST00000621778 588 ntBASIC2.52□□□□□ -2.01
CDH4P55283 IGHVIII-44-202ENST00000636235 289 ntBASIC2.52□□□□□ -2.01
CDH4P55283 AL359693.1-201ENST00000614959 2407 ntBASIC2.52□□□□□ -2.01
CDH4P55283 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDH4P55283 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH4P55283 AC092447.10-201ENST00000620607 1652 ntBASIC2.51□□□□□ -2.01
CDH4P55283 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH4P55283 RNU6-461P-201ENST00000364195 107 ntBASIC2.51□□□□□ -2.01
CDH4P55283 SNORA67.4-201ENST00000384688 142 ntBASIC2.51□□□□□ -2.01
CDH4P55283 MIR122-201ENST00000385044 85 ntBASIC2.51□□□□□ -2.01
CDH4P55283 RNU6-754P-201ENST00000391166 107 ntBASIC2.51□□□□□ -2.01
CDH4P55283 USP9YP33-201ENST00000412220 421 ntBASIC2.51□□□□□ -2.01
CDH4P55283 MTND1P21-201ENST00000412991 285 ntBASIC2.51□□□□□ -2.01
CDH4P55283 UBE2FP1-201ENST00000416536 447 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AL451054.2-201ENST00000420896 202 ntBASIC2.51□□□□□ -2.01
CDH4P55283 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH4P55283 USP9YP35-201ENST00000435696 412 ntBASIC2.51□□□□□ -2.01
CDH4P55283 COX7BP2-201ENST00000437976 242 ntBASIC2.51□□□□□ -2.01
CDH4P55283 EEF1A1P39-201ENST00000440791 250 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH4P55283 PAXBP1P1-201ENST00000449315 447 ntBASIC2.51□□□□□ -2.01
CDH4P55283 MTND2P39-201ENST00000457230 764 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC108729.1-201ENST00000487812 947 ntBASIC2.51□□□□□ -2.01
CDH4P55283 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH4P55283 AC135721.1-201ENST00000497954 479 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH4P55283 AC079395.1-201ENST00000510981 262 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH4P55283 RNA5SP471-201ENST00000516971 106 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC022634.1-201ENST00000520765 532 ntBASIC2.51□□□□□ -2.01
CDH4P55283 OR5BN1P-201ENST00000532955 829 ntBASIC2.51□□□□□ -2.01
CDH4P55283 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
CDH4P55283 MIR3908-201ENST00000579798 126 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AF038458.1-201ENST00000588406 262 ntBASIC2.51□□□□□ -2.01
CDH4P55283 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.51□□□□□ -2.01
CDH4P55283 AL158050.2-201ENST00000605336 568 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC090186.1-201ENST00000605991 572 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH4P55283 AC245297.2-201ENST00000610119 565 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC245517.5-201ENST00000611529 162 ntBASIC2.51□□□□□ -2.01
CDH4P55283 TUG1_2.1-201ENST00000614234 87 ntBASIC2.51□□□□□ -2.01
CDH4P55283 SDR42E1P2-201ENST00000614861 481 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC025034.2-201ENST00000623264 286 ntBASIC2.51□□□□□ -2.01
CDH4P55283 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDH4P55283 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.5□□□□□ -2.01
CDH4P55283 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH4P55283 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
CDH4P55283 RNU6-884P-201ENST00000363889 107 ntBASIC2.5□□□□□ -2.01
CDH4P55283 RNU6-621P-201ENST00000364752 109 ntBASIC2.5□□□□□ -2.01
CDH4P55283 SNORA41-201ENST00000384675 132 ntBASIC2.5□□□□□ -2.01
CDH4P55283 AL590084.2-201ENST00000401481 382 ntBASIC2.5□□□□□ -2.01
CDH4P55283 AL136310.1-201ENST00000404926 654 ntBASIC2.5□□□□□ -2.01
CDH4P55283 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDH4P55283 AL162578.1-201ENST00000406202 378 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms