Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 U3.15-201ENST00000365398 212 ntBASIC3.84□□□□□ -1.79
COPB1P53618 SNORA70.4-201ENST00000365509 134 ntBASIC3.84□□□□□ -1.79
COPB1P53618 U8.11-201ENST00000384699 133 ntBASIC3.84□□□□□ -1.79
COPB1P53618 U8.12-201ENST00000384701 133 ntBASIC3.84□□□□□ -1.79
COPB1P53618 RNU6-606P-201ENST00000384721 111 ntBASIC3.84□□□□□ -1.79
COPB1P53618 MIR558-201ENST00000384920 94 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AL356776.1-201ENST00000406574 447 ntBASIC3.84□□□□□ -1.79
COPB1P53618 RNU4-78P-201ENST00000410940 126 ntBASIC3.84□□□□□ -1.79
COPB1P53618 MTCO3P12-201ENST00000416718 547 ntBASIC3.84□□□□□ -1.79
COPB1P53618 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.84□□□□□ -1.79
COPB1P53618 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.84□□□□□ -1.79
COPB1P53618 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.84□□□□□ -1.79
COPB1P53618 AL445584.1-201ENST00000431451 330 ntBASIC3.84□□□□□ -1.79
COPB1P53618 CKS1BP5-201ENST00000434172 273 ntBASIC3.84□□□□□ -1.79
COPB1P53618 RPS20P5-201ENST00000434808 360 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AL138799.3-201ENST00000438968 350 ntBASIC3.84□□□□□ -1.79
COPB1P53618 BNIP3P2-201ENST00000441221 577 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC016696.1-201ENST00000446949 318 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC140076.1-201ENST00000449897 361 ntBASIC3.84□□□□□ -1.79
COPB1P53618 CACYBPP2-201ENST00000453625 678 ntBASIC3.84□□□□□ -1.79
COPB1P53618 HMGN2P7-201ENST00000456186 273 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.84□□□□□ -1.79
COPB1P53618 AL356010.1-201ENST00000456364 102 ntBASIC3.84□□□□□ -1.79
COPB1P53618 U8.18-201ENST00000459285 133 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AP000852.1-201ENST00000472460 573 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC021205.2-201ENST00000480069 347 ntBASIC3.84□□□□□ -1.79
COPB1P53618 RPL7P47-201ENST00000497299 556 ntBASIC3.84□□□□□ -1.79
COPB1P53618 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COPB1P53618 MTCO2P30-201ENST00000503662 364 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC114797.1-201ENST00000514003 728 ntBASIC3.84□□□□□ -1.79
COPB1P53618 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.84□□□□□ -1.79
COPB1P53618 RNU6-875P-201ENST00000516488 106 ntBASIC3.84□□□□□ -1.79
COPB1P53618 SNORA70.19-201ENST00000516717 90 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.84□□□□□ -1.79
COPB1P53618 AC011979.2-201ENST00000527568 352 ntBASIC3.84□□□□□ -1.79
COPB1P53618 OR4R1P-201ENST00000529879 463 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.84□□□□□ -1.79
COPB1P53618 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.84□□□□□ -1.79
COPB1P53618 MIR4293-201ENST00000584305 78 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.84□□□□□ -1.79
COPB1P53618 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AL158211.4-201ENST00000606988 584 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.84□□□□□ -1.79
COPB1P53618 AC093838.1-201ENST00000613014 469 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC084757.4-201ENST00000616350 526 ntBASIC3.84□□□□□ -1.79
COPB1P53618 U4.6-201ENST00000621618 127 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AC009033.1-201ENST00000624279 431 ntBASIC3.84□□□□□ -1.79
COPB1P53618 AL136313.1-201ENST00000624804 202 ntBASIC3.84□□□□□ -1.79
COPB1P53618 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.84□□□□□ -1.8
COPB1P53618 RIOK3P1-201ENST00000418778 1528 ntBASIC3.84□□□□□ -1.8
COPB1P53618 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.84□□□□□ -1.8
COPB1P53618 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
COPB1P53618 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
COPB1P53618 AL513302.2-201ENST00000562313 1842 ntBASIC3.84□□□□□ -1.8
COPB1P53618 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
COPB1P53618 AL021368.2-201ENST00000606125 5352 ntBASIC3.83□□□□□ -1.8
COPB1P53618 CBX3P1-201ENST00000325243 554 ntBASIC3.83□□□□□ -1.8
COPB1P53618 HSPE1P11-201ENST00000339579 310 ntBASIC3.83□□□□□ -1.8
COPB1P53618 SNORD9-201ENST00000362566 104 ntBASIC3.83□□□□□ -1.8
COPB1P53618 Y_RNA.160-201ENST00000363677 92 ntBASIC3.83□□□□□ -1.8
COPB1P53618 RNA5SP51-201ENST00000364750 119 ntBASIC3.83□□□□□ -1.8
COPB1P53618 Y_RNA.279-201ENST00000364763 95 ntBASIC3.83□□□□□ -1.8
COPB1P53618 Y_RNA.367-201ENST00000365544 101 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
COPB1P53618 SNORD3H-201ENST00000384486 214 ntBASIC3.83□□□□□ -1.8
COPB1P53618 RNU6-278P-201ENST00000390945 109 ntBASIC3.83□□□□□ -1.8
COPB1P53618 RNU6-516P-201ENST00000411381 104 ntBASIC3.83□□□□□ -1.8
COPB1P53618 OR9R1P-201ENST00000412200 877 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AL159169.1-201ENST00000421119 127 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COPB1P53618 AC012498.1-201ENST00000424037 437 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.83□□□□□ -1.8
COPB1P53618 YME1L1P1-201ENST00000429435 297 ntBASIC3.83□□□□□ -1.8
COPB1P53618 GOT2P5-201ENST00000433995 546 ntBASIC3.83□□□□□ -1.8
COPB1P53618 RPL23AP83-201ENST00000434984 473 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AC005094.1-201ENST00000440420 368 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.83□□□□□ -1.8
COPB1P53618 AC233702.1-201ENST00000482905 502 ntBASIC3.83□□□□□ -1.8
COPB1P53618 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COPB1P53618 RPL39P36-201ENST00000490784 156 ntBASIC3.83□□□□□ -1.8
COPB1P53618 RPL7P23-201ENST00000493874 747 ntBASIC3.83□□□□□ -1.8
COPB1P53618 HMGN1P12-201ENST00000499125 195 ntBASIC3.83□□□□□ -1.8
COPB1P53618 UBE2CP3-201ENST00000502715 450 ntBASIC3.83□□□□□ -1.8
COPB1P53618 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.83□□□□□ -1.8
COPB1P53618 AC046134.1-201ENST00000514454 666 ntBASIC3.83□□□□□ -1.8
COPB1P53618 RNU4-60P-201ENST00000517239 135 ntBASIC3.83□□□□□ -1.8
COPB1P53618 DEFB108D-201ENST00000527787 222 ntBASIC3.83□□□□□ -1.8
COPB1P53618 OR5BN1P-201ENST00000532955 829 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.83□□□□□ -1.8
COPB1P53618 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.83□□□□□ -1.8
COPB1P53618 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.83□□□□□ -1.8
COPB1P53618 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.83□□□□□ -1.8
COPB1P53618 OR4K8P-201ENST00000578842 1048 ntBASIC3.83□□□□□ -1.8
COPB1P53618 FGF7P1-201ENST00000582820 288 ntBASIC3.83□□□□□ -1.8
COPB1P53618 UBE2V2P2-201ENST00000587677 504 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AC067852.3-201ENST00000589177 561 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AL031176.1-201ENST00000604554 466 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AC008945.2-201ENST00000606056 604 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AL121992.2-201ENST00000606262 256 ntBASIC3.83□□□□□ -1.8
COPB1P53618 AC006504.8-201ENST00000621046 635 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms