Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MIR34A-201ENST00000385130 110 ntBASIC2.62□□□□□ -1.99
SSR1P43307 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SSR1P43307 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.62□□□□□ -1.99
SSR1P43307 RNU4-22P-201ENST00000411058 166 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.62□□□□□ -1.99
SSR1P43307 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AL356379.1-201ENST00000414105 126 ntBASIC2.62□□□□□ -1.99
SSR1P43307 Z85995.1-201ENST00000415547 335 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.62□□□□□ -1.99
SSR1P43307 GTF2IP20-201ENST00000431663 360 ntBASIC2.62□□□□□ -1.99
SSR1P43307 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.62□□□□□ -1.99
SSR1P43307 FGF7P5-201ENST00000441829 291 ntBASIC2.62□□□□□ -1.99
SSR1P43307 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SSR1P43307 PSPHP1-201ENST00000450062 261 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.62□□□□□ -1.99
SSR1P43307 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.62□□□□□ -1.99
SSR1P43307 RNU6-840P-201ENST00000517275 65 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.62□□□□□ -1.99
SSR1P43307 YWHAZP1-201ENST00000556286 722 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.62□□□□□ -1.99
SSR1P43307 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.62□□□□□ -1.99
SSR1P43307 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.62□□□□□ -1.99
SSR1P43307 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.62□□□□□ -1.99
SSR1P43307 HMGN2P15-201ENST00000585707 270 ntBASIC2.62□□□□□ -1.99
SSR1P43307 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.62□□□□□ -1.99
SSR1P43307 BNIP3P22-201ENST00000593399 556 ntBASIC2.62□□□□□ -1.99
SSR1P43307 AC107075.1-201ENST00000613695 314 ntBASIC2.62□□□□□ -1.99
SSR1P43307 MIR7515-201ENST00000637837 67 ntBASIC2.62□□□□□ -1.99
SSR1P43307 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSR1P43307 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSR1P43307 Y_RNA.192-201ENST00000363977 102 ntBASIC2.61□□□□□ -1.99
SSR1P43307 RNU6-1078P-201ENST00000364522 103 ntBASIC2.61□□□□□ -1.99
SSR1P43307 RNU6-1242P-201ENST00000391052 103 ntBASIC2.61□□□□□ -1.99
SSR1P43307 Z92545.1-201ENST00000411782 234 ntBASIC2.61□□□□□ -1.99
SSR1P43307 HMGN2P38-201ENST00000423806 265 ntBASIC2.61□□□□□ -1.99
SSR1P43307 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.61□□□□□ -1.99
SSR1P43307 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.61□□□□□ -1.99
SSR1P43307 RPL23AP83-201ENST00000434984 473 ntBASIC2.61□□□□□ -1.99
SSR1P43307 COX7BP2-201ENST00000437976 242 ntBASIC2.61□□□□□ -1.99
SSR1P43307 MTND4P6-201ENST00000438297 472 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AL117351.1-201ENST00000438864 766 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AL831737.1-201ENST00000441288 271 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.61□□□□□ -1.99
SSR1P43307 RPL12P25-201ENST00000455592 494 ntBASIC2.61□□□□□ -1.99
SSR1P43307 RNU6-420P-201ENST00000458780 107 ntBASIC2.61□□□□□ -1.99
SSR1P43307 SNORD121B-201ENST00000458838 81 ntBASIC2.61□□□□□ -1.99
SSR1P43307 RNU7-23P-201ENST00000459465 62 ntBASIC2.61□□□□□ -1.99
SSR1P43307 MTND1P16-201ENST00000465177 898 ntBASIC2.61□□□□□ -1.99
SSR1P43307 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.61□□□□□ -1.99
SSR1P43307 AC097462.2-201ENST00000504623 481 ntBASIC2.61□□□□□ -1.99
SSR1P43307 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.61□□□□□ -1.99
SSR1P43307 SCARNA15.2-201ENST00000516409 127 ntBASIC2.61□□□□□ -1.99
SSR1P43307 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SSR1P43307 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.61□□□□□ -1.99
SSR1P43307 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.61□□□□□ -1.99
SSR1P43307 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.61□□□□□ -1.99
SSR1P43307 CYCSP26-201ENST00000534107 320 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.61□□□□□ -1.99
SSR1P43307 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AL158050.2-201ENST00000605336 568 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AC135507.1-201ENST00000607214 561 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AC107214.2-201ENST00000608204 634 ntBASIC2.61□□□□□ -1.99
SSR1P43307 OR1S1-201ENST00000624470 978 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AP000720.1-201ENST00000625091 483 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AC099063.3-201ENST00000642066 185 ntBASIC2.61□□□□□ -1.99
SSR1P43307 AL079343.1-201ENST00000572358 1771 ntBASIC2.61□□□□□ -1.99
SSR1P43307 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.61□□□□□ -1.99
SSR1P43307 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSR1P43307 SNORA23-201ENST00000365128 182 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AL445529.1-201ENST00000398713 389 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AL109755.1-201ENST00000401791 649 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AL356421.1-201ENST00000403255 413 ntBASIC2.6□□□□□ -1.99
SSR1P43307 MIR1284-201ENST00000408337 120 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.6□□□□□ -1.99
SSR1P43307 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.6□□□□□ -1.99
SSR1P43307 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.6□□□□□ -1.99
SSR1P43307 AC063976.3-201ENST00000426849 329 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.6□□□□□ -1.99
SSR1P43307 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.6□□□□□ -1.99
SSR1P43307 ZYG11AP1-201ENST00000430329 837 ntBASIC2.6□□□□□ -1.99
SSR1P43307 RPS25P9-201ENST00000435591 252 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.6□□□□□ -1.99
SSR1P43307 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.6□□□□□ -1.99
SSR1P43307 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.6□□□□□ -1.99
SSR1P43307 AC005410.1-202ENST00000460347 485 ntBASIC2.6□□□□□ -1.99
SSR1P43307 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.6□□□□□ -1.99
SSR1P43307 RN7SKP24-201ENST00000515888 284 ntBASIC2.6□□□□□ -1.99
SSR1P43307 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.6□□□□□ -1.99
SSR1P43307 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.6□□□□□ -1.99
SSR1P43307 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.6□□□□□ -1.99
SSR1P43307 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.6□□□□□ -1.99
SSR1P43307 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.6□□□□□ -1.99
SSR1P43307 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.6□□□□□ -1.99
SSR1P43307 AL033523.1-201ENST00000605153 153 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AL139344.1-201ENST00000605228 195 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AF129408.1-201ENST00000608767 431 ntBASIC2.6□□□□□ -1.99
SSR1P43307 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.6□□□□□ -1.99
SSR1P43307 AL357080.1-201ENST00000617394 239 ntBASIC2.6□□□□□ -1.99
SSR1P43307 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms