Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RAC1P6-201ENST00000423911 575 ntBASIC3.36□□□□□ -1.87
HADHAP40939 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.36□□□□□ -1.87
HADHAP40939 AC097713.2-201ENST00000430199 356 ntBASIC3.36□□□□□ -1.87
HADHAP40939 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.36□□□□□ -1.87
HADHAP40939 HMGB1P27-201ENST00000431429 603 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AC119618.1-201ENST00000434191 222 ntBASIC3.36□□□□□ -1.87
HADHAP40939 MTND1P28-201ENST00000435623 950 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AC005019.1-201ENST00000436455 431 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.36□□□□□ -1.87
HADHAP40939 MTND2P4-201ENST00000445034 1004 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.36□□□□□ -1.87
HADHAP40939 RPL31P3-201ENST00000458430 332 ntBASIC3.36□□□□□ -1.87
HADHAP40939 SNORD42A-201ENST00000459584 64 ntBASIC3.36□□□□□ -1.87
HADHAP40939 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.36□□□□□ -1.87
HADHAP40939 AL135752.1-201ENST00000479477 471 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AC114797.1-201ENST00000514003 728 ntBASIC3.36□□□□□ -1.87
HADHAP40939 SNORA31.3-201ENST00000516029 96 ntBASIC3.36□□□□□ -1.87
HADHAP40939 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.36□□□□□ -1.87
HADHAP40939 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.36□□□□□ -1.87
HADHAP40939 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.36□□□□□ -1.87
HADHAP40939 MIR548AB-201ENST00000584917 84 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AC110760.3-201ENST00000598794 467 ntBASIC3.36□□□□□ -1.87
HADHAP40939 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AC034102.8-201ENST00000615146 484 ntBASIC3.36□□□□□ -1.87
HADHAP40939 AL158063.1-201ENST00000615349 536 ntBASIC3.36□□□□□ -1.87
HADHAP40939 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HADHAP40939 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HADHAP40939 RNA5SP139-201ENST00000364340 117 ntBASIC3.35□□□□□ -1.87
HADHAP40939 RNA5SP267-201ENST00000364893 126 ntBASIC3.35□□□□□ -1.87
HADHAP40939 CD24P4-201ENST00000382840 243 ntBASIC3.35□□□□□ -1.87
HADHAP40939 RNU6-217P-201ENST00000384164 104 ntBASIC3.35□□□□□ -1.87
HADHAP40939 SNORA9-201ENST00000384215 133 ntBASIC3.35□□□□□ -1.87
HADHAP40939 MIR325-201ENST00000385260 98 ntBASIC3.35□□□□□ -1.87
HADHAP40939 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HADHAP40939 RPL23AP32-201ENST00000395315 459 ntBASIC3.35□□□□□ -1.87
HADHAP40939 RPS3AP3-201ENST00000411933 242 ntBASIC3.35□□□□□ -1.87
HADHAP40939 RPS15AP12-201ENST00000419498 388 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.35□□□□□ -1.87
HADHAP40939 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.35□□□□□ -1.87
HADHAP40939 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.35□□□□□ -1.87
HADHAP40939 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.35□□□□□ -1.87
HADHAP40939 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.35□□□□□ -1.87
HADHAP40939 USP9YP15-201ENST00000442391 422 ntBASIC3.35□□□□□ -1.87
HADHAP40939 MTND6P13-201ENST00000443510 523 ntBASIC3.35□□□□□ -1.87
HADHAP40939 MTATP6P26-201ENST00000445926 662 ntBASIC3.35□□□□□ -1.87
HADHAP40939 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HADHAP40939 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.35□□□□□ -1.87
HADHAP40939 RN7SL601P-201ENST00000471221 293 ntBASIC3.35□□□□□ -1.87
HADHAP40939 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.35□□□□□ -1.87
HADHAP40939 LARP1BP2-201ENST00000486594 519 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC093663.1-201ENST00000497190 394 ntBASIC3.35□□□□□ -1.87
HADHAP40939 NDUFB4P2-201ENST00000509515 391 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.35□□□□□ -1.87
HADHAP40939 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.35□□□□□ -1.87
HADHAP40939 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.35□□□□□ -1.87
HADHAP40939 AP003122.4-201ENST00000530980 758 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.35□□□□□ -1.87
HADHAP40939 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.35□□□□□ -1.87
HADHAP40939 NCAPGP2-201ENST00000557911 754 ntBASIC3.35□□□□□ -1.87
HADHAP40939 MIR5195-201ENST00000583555 115 ntBASIC3.35□□□□□ -1.87
HADHAP40939 NRBF2P1-201ENST00000587407 859 ntBASIC3.35□□□□□ -1.87
HADHAP40939 HMGN1P30-201ENST00000589286 268 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.35□□□□□ -1.87
HADHAP40939 AL161756.2-201ENST00000604597 246 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AL451064.1-201ENST00000607718 471 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC103710.2-201ENST00000609912 942 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AP001506.1-201ENST00000615444 211 ntBASIC3.35□□□□□ -1.87
HADHAP40939 AC006338.1-201ENST00000618453 749 ntBASIC3.35□□□□□ -1.87
HADHAP40939 Z69908.1-201ENST00000622603 247 ntBASIC3.35□□□□□ -1.87
HADHAP40939 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.35□□□□□ -1.87
HADHAP40939 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
HADHAP40939 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HADHAP40939 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HADHAP40939 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HADHAP40939 GNG5P1-201ENST00000255500 204 ntBASIC3.34□□□□□ -1.87
HADHAP40939 SNORD56.3-201ENST00000363507 71 ntBASIC3.34□□□□□ -1.87
HADHAP40939 RNU1-33P-201ENST00000364249 162 ntBASIC3.34□□□□□ -1.87
HADHAP40939 RNVU1-14-201ENST00000384770 164 ntBASIC3.34□□□□□ -1.87
HADHAP40939 MIR483-201ENST00000385070 76 ntBASIC3.34□□□□□ -1.87
HADHAP40939 RNA5SP252-201ENST00000391131 119 ntBASIC3.34□□□□□ -1.87
HADHAP40939 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HADHAP40939 NDUFS5P1-201ENST00000405668 289 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.34□□□□□ -1.87
HADHAP40939 ZNF863P-201ENST00000426746 417 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AC007919.1-201ENST00000429380 217 ntBASIC3.34□□□□□ -1.87
HADHAP40939 FCF1P1-201ENST00000432690 571 ntBASIC3.34□□□□□ -1.87
HADHAP40939 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.34□□□□□ -1.87
HADHAP40939 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.34□□□□□ -1.87
HADHAP40939 RPS27P29-201ENST00000463110 252 ntBASIC3.34□□□□□ -1.87
HADHAP40939 KC877373.1-201ENST00000479066 408 ntBASIC3.34□□□□□ -1.87
HADHAP40939 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.34□□□□□ -1.87
HADHAP40939 AC010587.1-201ENST00000505809 469 ntBASIC3.34□□□□□ -1.87
HADHAP40939 SNORA70.24-201ENST00000517233 118 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.34□□□□□ -1.87
HADHAP40939 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.34□□□□□ -1.87
HADHAP40939 AC060788.1-201ENST00000521318 469 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.34□□□□□ -1.87
HADHAP40939 AP003181.2-201ENST00000528941 181 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AP000867.2-201ENST00000532468 320 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms