Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AP1S2P1-201ENST00000457344 379 ntBASIC5□□□□□ -1.61
PDE6BP35913 RPL21P99-201ENST00000480369 423 ntBASIC5□□□□□ -1.61
PDE6BP35913 RN7SL283P-201ENST00000489055 303 ntBASIC5□□□□□ -1.61
PDE6BP35913 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5□□□□□ -1.61
PDE6BP35913 AC108145.1-201ENST00000503770 153 ntBASIC5□□□□□ -1.61
PDE6BP35913 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5□□□□□ -1.61
PDE6BP35913 AC021146.1-201ENST00000511202 716 ntBASIC5□□□□□ -1.61
PDE6BP35913 SMURF2P1-201ENST00000514992 481 ntBASIC5□□□□□ -1.61
PDE6BP35913 SNORA70.24-201ENST00000517233 118 ntBASIC5□□□□□ -1.61
PDE6BP35913 RNA5SP179-201ENST00000517284 121 ntBASIC5□□□□□ -1.61
PDE6BP35913 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5□□□□□ -1.61
PDE6BP35913 AC103843.2-201ENST00000530523 682 ntBASIC5□□□□□ -1.61
PDE6BP35913 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5□□□□□ -1.61
PDE6BP35913 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDE6BP35913 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5□□□□□ -1.61
PDE6BP35913 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5□□□□□ -1.61
PDE6BP35913 MIR3146-201ENST00000580367 79 ntBASIC5□□□□□ -1.61
PDE6BP35913 MIR3942-201ENST00000585264 109 ntBASIC5□□□□□ -1.61
PDE6BP35913 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5□□□□□ -1.61
PDE6BP35913 LINC00901.1-201ENST00000617252 152 ntBASIC5□□□□□ -1.61
PDE6BP35913 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PDE6BP35913 AC004972.1-201ENST00000623934 2209 ntBASIC5□□□□□ -1.61
PDE6BP35913 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 Y_RNA.112-201ENST00000363250 102 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 Y_RNA.167-201ENST00000363735 109 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 RNA5SP97-201ENST00000365006 84 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 RNA5SP22-201ENST00000365393 109 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 MT-TG-201ENST00000387429 68 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 AL121834.1-202ENST00000404494 277 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.99□□□□□ -1.61
PDE6BP35913 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 CBX3P6-201ENST00000430257 527 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 HMGN2P31-201ENST00000432430 273 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.99□□□□□ -1.61
PDE6BP35913 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.99□□□□□ -1.61
PDE6BP35913 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 MRPS31P2-201ENST00000451581 518 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.99□□□□□ -1.61
PDE6BP35913 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.99□□□□□ -1.61
PDE6BP35913 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 RNU6-1088P-201ENST00000516850 104 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 RNU6-352P-201ENST00000516908 107 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 IGKV2D-19-201ENST00000523346 262 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 AC026470.2-201ENST00000561492 181 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 AC087499.8-201ENST00000578406 226 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 UBE2L4-201ENST00000587688 464 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 AC091167.4-201ENST00000605079 184 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 AC004908.2-201ENST00000609090 574 ntBASIC4.99□□□□□ -1.61
PDE6BP35913 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDE6BP35913 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PDE6BP35913 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDE6BP35913 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDE6BP35913 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDE6BP35913 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDE6BP35913 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PDE6BP35913 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDE6BP35913 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDE6BP35913 RNA5SP72-201ENST00000364442 117 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 Y_RNA.373-201ENST00000365600 103 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 RNU6-39P-201ENST00000384344 107 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 SNORD96B-201ENST00000386148 79 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 MTCYBP4-201ENST00000401524 249 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 MIR548F5-201ENST00000408421 86 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 BX323014.1-201ENST00000412876 237 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDE6BP35913 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.98□□□□□ -1.61
PDE6BP35913 RPS20P5-201ENST00000434808 360 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 HSPE1P28-201ENST00000443139 211 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 snoU109.4-201ENST00000458953 143 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 AC055855.1-201ENST00000489563 579 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.98□□□□□ -1.61
PDE6BP35913 Y_RNA.682-201ENST00000516457 100 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 AC022882.1-201ENST00000532142 501 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.98□□□□□ -1.61
PDE6BP35913 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.98□□□□□ -1.61
PDE6BP35913 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.98□□□□□ -1.61
PDE6BP35913 RPL23AP87-202ENST00000573039 466 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 MIR3200-201ENST00000580767 85 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 MIR4680-201ENST00000580906 66 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 MIR4424-201ENST00000585257 86 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 GLUD1P4-201ENST00000590914 418 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 CYP2C61P-201ENST00000604072 290 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 NUTF2P8-201ENST00000604593 363 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 HSPE1P14-201ENST00000605812 302 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 RMST_9.1-201ENST00000619945 193 ntBASIC4.98□□□□□ -1.61
PDE6BP35913 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms