Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC104985.3-201ENST00000623479 597 ntBASIC2.25□□□□□ -2.05
SCN4AP35499 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SCN4AP35499 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SCN4AP35499 RNU4-51P-201ENST00000364206 140 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 RNU6-115P-201ENST00000364310 107 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 RNA5SP138-201ENST00000365098 114 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AL136310.1-201ENST00000404926 654 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 RNA5SP492-201ENST00000411330 114 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 AL358453.1-201ENST00000422522 250 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 DPRXP1-201ENST00000426312 460 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN4AP35499 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.24□□□□□ -2.05
SCN4AP35499 AC079395.1-201ENST00000510981 262 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AC107393.1-201ENST00000512403 346 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SCN4AP35499 RNU6-885P-201ENST00000516607 104 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SCN4AP35499 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 ARL2BPP2-201ENST00000550907 489 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.24□□□□□ -2.05
SCN4AP35499 MTND3P13-201ENST00000574391 343 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 BNIP3P27-201ENST00000599991 412 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 XIAPP1-201ENST00000603162 600 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AC009237.15-201ENST00000610252 501 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 VIS1.1-201ENST00000610517 203 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 PABPC1P9-201ENST00000426076 1612 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN4AP35499 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN4AP35499 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN4AP35499 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SCN4AP35499 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 RNU5E-10P-201ENST00000363506 118 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 Y_RNA.191-201ENST00000363972 113 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 MIR506-201ENST00000384998 124 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 BEND7P1-201ENST00000422058 457 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
SCN4AP35499 AL137159.1-201ENST00000452808 512 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 SUMO2P2-201ENST00000456482 255 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AC092798.1-201ENST00000458542 409 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AC104472.2-201ENST00000469035 601 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SCN4AP35499 GZMAP1-201ENST00000503054 631 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.24□□□□□ -2.05
SCN4AP35499 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.24□□□□□ -2.05
SCN4AP35499 BX248123.2-201ENST00000606318 124 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AC243773.3-201ENST00000613270 256 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 AL355810.1-201ENST00000614629 552 ntBASIC2.24□□□□□ -2.05
SCN4AP35499 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.23□□□□□ -2.05
SCN4AP35499 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SCN4AP35499 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SCN4AP35499 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SCN4AP35499 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 RNU6-1300P-201ENST00000391046 108 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 MIR1294-201ENST00000408503 142 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 RNU6-712P-201ENST00000410558 100 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC109780.2-201ENST00000413467 845 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC106883.1-201ENST00000418805 562 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN4AP35499 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.23□□□□□ -2.05
SCN4AP35499 MTATP6P14-201ENST00000455189 673 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
SCN4AP35499 RPL21P131-201ENST00000497298 483 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC135721.1-201ENST00000497954 479 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 COX7A2P2-201ENST00000505291 250 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN4AP35499 AC010460.2-201ENST00000509054 677 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN4AP35499 RNU6-276P-201ENST00000516114 96 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 SNORA19.3-201ENST00000516165 130 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 IGLV3-17-201ENST00000519099 244 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN4AP35499 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN4AP35499 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.23□□□□□ -2.05
SCN4AP35499 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.23□□□□□ -2.05
SCN4AP35499 AC091057.3-201ENST00000602684 733 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC069304.2-201ENST00000605154 435 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC018645.2-201ENST00000609151 472 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC025588.4-201ENST00000615802 908 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 AC084824.4-201ENST00000620106 731 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 Z82209.1-201ENST00000422141 2135 ntBASIC2.23□□□□□ -2.05
SCN4AP35499 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SCN4AP35499 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SCN4AP35499 Y_RNA.224-201ENST00000364308 111 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RNY1P14-201ENST00000384426 108 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RNU1-57P-201ENST00000384491 166 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RNU6-821P-201ENST00000390995 107 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RNA5SP338-201ENST00000410495 85 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RPS7P9-201ENST00000414704 586 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 AL356320.2-201ENST00000417263 507 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RPS6P14-201ENST00000425165 719 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 AC012497.1-201ENST00000429392 575 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms