Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HOXA13P31271 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HOXA13P31271 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA13P31271 AL365361.1-201ENST00000566942 3481 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA13P31271 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA13P31271 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
HOXA13P31271 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 RNU5A-8P-201ENST00000364102 114 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 SNORA75-201ENST00000384158 137 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 MIR1290-201ENST00000408735 78 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 Y_RNA.599-201ENST00000410489 109 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 Y_RNA.608-201ENST00000410647 95 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 ELOCP17-201ENST00000414751 326 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA13P31271 AL353777.1-201ENST00000425552 326 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC022018.1-201ENST00000430685 241 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 TXNP1-201ENST00000441872 371 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA13P31271 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA13P31271 RPL37P4-201ENST00000448908 268 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 SSXP1-201ENST00000453640 473 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC008481.1-201ENST00000463278 396 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 RPS3AP14-201ENST00000483907 780 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA13P31271 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA13P31271 RNA5SP217-201ENST00000515959 91 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 DEFB108A-201ENST00000530110 222 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA13P31271 AP002453.2-201ENST00000533503 320 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 H3F3AP1-201ENST00000559984 334 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA13P31271 RPL23AP84-201ENST00000571193 464 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 MIR3921-201ENST00000577308 85 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 LARP7P3-201ENST00000579888 337 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA13P31271 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA13P31271 DEFB131E-202ENST00000602581 683 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC015871.2-201ENST00000603605 948 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AC104073.3-201ENST00000610942 955 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA13P31271 AC104010.1-201ENST00000616889 150 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AL136313.1-201ENST00000624804 202 ntBASIC3.45□□□□□ -1.86
HOXA13P31271 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA13P31271 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA13P31271 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA13P31271 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA13P31271 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA13P31271 RNY4P16-201ENST00000364768 94 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXA13P31271 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXA13P31271 RPS7P13-201ENST00000413955 498 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC009237.5-201ENST00000414271 501 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA13P31271 RPS15AP12-201ENST00000419498 388 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 RPL21P32-201ENST00000419877 477 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 COTL1P1-201ENST00000422309 375 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA13P31271 TIMM9P1-201ENST00000436122 256 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL022238.1-201ENST00000442557 355 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC025750.2-201ENST00000442609 450 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA13P31271 RPL17P49-201ENST00000443728 411 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA13P31271 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXA13P31271 SNRPFP4-201ENST00000456366 242 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 RN7SL442P-201ENST00000473804 320 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL049830.2-201ENST00000480072 201 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA13P31271 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA13P31271 AC022878.1-201ENST00000530684 149 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC123904.3-201ENST00000547218 814 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL355836.1-201ENST00000555951 870 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA13P31271 MTND1P15-201ENST00000579262 949 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 KC877982.1-201ENST00000602313 470 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC008277.2-201ENST00000605196 797 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AL139286.2-201ENST00000606838 396 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC093732.2-201ENST00000607950 274 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA13P31271 AL391813.2-201ENST00000609113 322 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC108747.1-201ENST00000609508 535 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AC026585.1-201ENST00000619582 524 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 U7.8-201ENST00000619968 63 ntBASIC3.44□□□□□ -1.86
HOXA13P31271 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA13P31271 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
HOXA13P31271 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA13P31271 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA13P31271 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA13P31271 Y_RNA.41-201ENST00000362646 102 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 RNU6-1119P-201ENST00000384349 108 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 MIR591-201ENST00000385290 95 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 SNORA40.3-201ENST00000390964 122 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA13P31271 UBE2D3P2-201ENST00000424409 445 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AL356867.1-201ENST00000429623 299 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 NEK4P1-201ENST00000433383 879 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms