Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR578-201ENST00000384828 96 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 MIR325-201ENST00000385260 98 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC3P19447 VN1R36P-201ENST00000414936 291 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 AC092573.2-201ENST00000434546 243 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 OR4C10P-201ENST00000434991 931 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 AC108751.2-201ENST00000469993 231 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 AC012181.1-201ENST00000479895 423 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 MTND3P25-201ENST00000509243 135 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 PARP4P3-201ENST00000510265 317 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 RNU6-1332P-201ENST00000516666 104 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 RNU6-1315P-201ENST00000517187 99 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 MIR2116-201ENST00000517221 80 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 AC138761.3-201ENST00000579993 334 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.15□□□□□ -1.59
ERCC3P19447 AC015813.4-201ENST00000610469 179 ntBASIC5.15□□□□□ -1.59
ERCC3P19447 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.15□□□□□ -1.59
ERCC3P19447 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.15□□□□□ -1.59
ERCC3P19447 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.15□□□□□ -1.59
ERCC3P19447 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC3P19447 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ERCC3P19447 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC3P19447 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ERCC3P19447 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ERCC3P19447 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ERCC3P19447 MARK2P15-201ENST00000432204 2186 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC3P19447 MIR448-201ENST00000362131 111 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 RNA5SP52-201ENST00000362448 134 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 RNU6-371P-201ENST00000364283 108 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 Z85995.1-201ENST00000415547 335 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.14□□□□□ -1.59
ERCC3P19447 AC236972.2-201ENST00000434979 310 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 RPL21P104-201ENST00000464143 478 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 MTCO1P29-201ENST00000496868 288 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.14□□□□□ -1.59
ERCC3P19447 Y_RNA.691-201ENST00000516611 103 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 RNU6-566P-201ENST00000516790 107 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.14□□□□□ -1.59
ERCC3P19447 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.14□□□□□ -1.59
ERCC3P19447 MIR3690-201ENST00000580266 75 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 MIR3672-201ENST00000584290 82 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 NUTF2P8-201ENST00000604593 363 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 AC002044.1-201ENST00000606707 158 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 AL442067.2-201ENST00000614033 363 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.14□□□□□ -1.59
ERCC3P19447 AC010300.1-201ENST00000600671 5134 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
ERCC3P19447 AL359922.3-201ENST00000624779 1670 ntBASIC5.14□□□□□ -1.59
ERCC3P19447 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ERCC3P19447 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
ERCC3P19447 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC3P19447 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC3P19447 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC3P19447 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC3P19447 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC3P19447 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC3P19447 MIR331-201ENST00000362302 94 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 Y_RNA.387-201ENST00000383918 102 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 Y_RNA.419-201ENST00000384041 102 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 SNORD96B-201ENST00000386148 79 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AC074085.1-201ENST00000413598 418 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 RPL7P10-201ENST00000417407 739 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC3P19447 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC3P19447 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC3P19447 CECR9-201ENST00000453421 199 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 Y_RNA.632-201ENST00000459189 102 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.13□□□□□ -1.59
ERCC3P19447 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.13□□□□□ -1.59
ERCC3P19447 RN7SKP24-201ENST00000515888 284 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 RNU6-559P-201ENST00000516151 98 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 RNU6-1153P-201ENST00000516760 105 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 TRAV8-5-201ENST00000537369 341 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AL157871.3-201ENST00000557231 293 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AC106785.1-201ENST00000565935 262 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 MIR5692C1-201ENST00000585309 91 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AC113403.1-201ENST00000604910 193 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AC245389.1-201ENST00000605141 529 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.13□□□□□ -1.59
ERCC3P19447 RNA5SP196-201ENST00000625967 102 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 MAPK10-303ENST00000641324 3959 ntBASIC5.13□□□□□ -1.59
ERCC3P19447 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC3P19447 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ERCC3P19447 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
ERCC3P19447 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ERCC3P19447 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
ERCC3P19447 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC3P19447 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
ERCC3P19447 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.12□□□□□ -1.59
ERCC3P19447 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.12□□□□□ -1.59
ERCC3P19447 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC3P19447 Y_RNA.33-201ENST00000362591 102 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 RNA5SP317-201ENST00000410176 116 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 RNU6-1025P-201ENST00000410629 104 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 RNA5SP311-201ENST00000411290 116 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 AL158156.1-201ENST00000422509 473 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.12□□□□□ -1.59
ERCC3P19447 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.12□□□□□ -1.59
ERCC3P19447 Y_RNA.635-201ENST00000459041 101 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms