Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ST13P20-201ENST00000447996 1065 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.68□□□□□ -1.98
XRCC1P18887 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.68□□□□□ -1.98
XRCC1P18887 TBCAP3-201ENST00000512475 312 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AP004247.1-201ENST00000531556 1289 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
XRCC1P18887 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.68□□□□□ -1.98
XRCC1P18887 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.68□□□□□ -1.98
XRCC1P18887 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.68□□□□□ -1.98
XRCC1P18887 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.68□□□□□ -1.98
XRCC1P18887 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.68□□□□□ -1.98
XRCC1P18887 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.68□□□□□ -1.98
XRCC1P18887 HMGB1P6-201ENST00000569046 646 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AC002400.1-201ENST00000569310 726 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 MIR4319-201ENST00000577285 85 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
XRCC1P18887 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.68□□□□□ -1.98
XRCC1P18887 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
XRCC1P18887 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.68□□□□□ -1.98
XRCC1P18887 OR2AS2P-201ENST00000606902 342 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 AL607023.1-201ENST00000620045 248 ntBASIC2.68□□□□□ -1.98
XRCC1P18887 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
XRCC1P18887 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
XRCC1P18887 AC091564.4-201ENST00000533934 2194 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
XRCC1P18887 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
XRCC1P18887 MTND5P33-201ENST00000571250 1450 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AL391994.1-201ENST00000254724 282 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
XRCC1P18887 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.67□□□□□ -1.98
XRCC1P18887 MIR592-201ENST00000384959 97 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 RNA5SP252-201ENST00000391131 119 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AL109755.1-201ENST00000401791 649 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.67□□□□□ -1.98
XRCC1P18887 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.67□□□□□ -1.98
XRCC1P18887 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.67□□□□□ -1.98
XRCC1P18887 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 UBBP3-201ENST00000445497 241 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 AC010099.1-201ENST00000455434 375 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AL031183.1-201ENST00000457667 207 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 SNORD109B-201ENST00000458961 67 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 SNORD109A-201ENST00000459128 67 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 RNU6-1256P-201ENST00000516539 103 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 MRPS36P3-201ENST00000519284 130 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
XRCC1P18887 AP000867.2-201ENST00000532468 320 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC023538.1-201ENST00000534576 736 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.67□□□□□ -1.98
XRCC1P18887 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 AMZ2P1-203ENST00000565833 850 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.67□□□□□ -1.98
XRCC1P18887 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.67□□□□□ -1.98
XRCC1P18887 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.67□□□□□ -1.98
XRCC1P18887 UBE2L4-201ENST00000587688 464 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 BNIP3P23-201ENST00000599655 511 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC112187.2-201ENST00000604345 283 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AL035413.2-201ENST00000604801 525 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC008277.2-201ENST00000605196 797 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AL139344.1-201ENST00000605228 195 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC007619.2-201ENST00000605743 379 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC004908.2-201ENST00000609090 574 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AL158801.5-201ENST00000623123 465 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC007490.1-201ENST00000624321 703 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 OR5H6-203ENST00000642105 978 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AL049641.1-201ENST00000441055 1948 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 AC007785.2-201ENST00000598627 1916 ntBASIC2.67□□□□□ -1.98
XRCC1P18887 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.67□□□□□ -1.98
XRCC1P18887 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
XRCC1P18887 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
XRCC1P18887 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.66□□□□□ -1.98
XRCC1P18887 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
XRCC1P18887 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 RNU6-741P-201ENST00000383889 107 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 RNU6-1200P-201ENST00000384162 107 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 RNU6-769P-201ENST00000384407 104 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 RNU6-1035P-201ENST00000384477 107 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
XRCC1P18887 UBE2V1P2-201ENST00000397758 440 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.66□□□□□ -1.98
XRCC1P18887 HMGB1P11-201ENST00000413899 637 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.66□□□□□ -1.98
XRCC1P18887 AL512844.2-201ENST00000433990 593 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.66□□□□□ -1.98
XRCC1P18887 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.66□□□□□ -1.98
XRCC1P18887 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.66□□□□□ -1.98
XRCC1P18887 CBWD4P-201ENST00000445695 655 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.66□□□□□ -1.98
XRCC1P18887 AC108938.1-201ENST00000451204 136 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.66□□□□□ -1.98
XRCC1P18887 AC090525.1-201ENST00000479116 478 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
XRCC1P18887 RNA5SP291-201ENST00000517222 105 ntBASIC2.66□□□□□ -1.98
XRCC1P18887 HMGB1P41-201ENST00000520234 440 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms