Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AL159987.2-201ENST00000432754 307 ntBASIC3.41□□□□□ -1.86
MMP2P08253 SNRPEP4-201ENST00000435815 279 ntBASIC3.41□□□□□ -1.86
MMP2P08253 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MMP2P08253 AC008264.1-201ENST00000447612 367 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC132479.1-201ENST00000449160 144 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC140076.1-201ENST00000449897 361 ntBASIC3.41□□□□□ -1.86
MMP2P08253 SNRPGP6-201ENST00000451124 220 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP2P08253 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP2P08253 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP2P08253 CENPBD1P1-201ENST00000464061 469 ntBASIC3.41□□□□□ -1.86
MMP2P08253 HSPE1P6-201ENST00000479457 291 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP2P08253 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP2P08253 AC007182.2-201ENST00000489251 402 ntBASIC3.41□□□□□ -1.86
MMP2P08253 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.41□□□□□ -1.86
MMP2P08253 FCF1P8-201ENST00000510322 597 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP2P08253 GMPSP1-201ENST00000514075 579 ntBASIC3.41□□□□□ -1.86
MMP2P08253 RNU2-10P-201ENST00000516375 211 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC100870.1-201ENST00000522035 505 ntBASIC3.41□□□□□ -1.86
MMP2P08253 FAM92A1P1-201ENST00000528023 890 ntBASIC3.41□□□□□ -1.86
MMP2P08253 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP2P08253 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP2P08253 AC006557.5-201ENST00000603126 811 ntBASIC3.41□□□□□ -1.86
MMP2P08253 RMST_8.1-201ENST00000610287 165 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AL592295.2-201ENST00000612578 206 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.41□□□□□ -1.86
MMP2P08253 MIR6863-201ENST00000636112 90 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC068137.3-201ENST00000639191 341 ntBASIC3.41□□□□□ -1.86
MMP2P08253 AC073869.6-201ENST00000640656 341 ntBASIC3.41□□□□□ -1.86
MMP2P08253 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MMP2P08253 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MMP2P08253 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.41□□□□□ -1.86
MMP2P08253 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MMP2P08253 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
MMP2P08253 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
MMP2P08253 DEFB108F-201ENST00000344638 222 ntBASIC3.4□□□□□ -1.87
MMP2P08253 Y_RNA.6-201ENST00000362350 114 ntBASIC3.4□□□□□ -1.87
MMP2P08253 RNU6-1284P-201ENST00000363701 100 ntBASIC3.4□□□□□ -1.87
MMP2P08253 SNORA36C-201ENST00000384289 132 ntBASIC3.4□□□□□ -1.87
MMP2P08253 RNU6-39P-201ENST00000384344 107 ntBASIC3.4□□□□□ -1.87
MMP2P08253 RNU6-456P-201ENST00000384493 107 ntBASIC3.4□□□□□ -1.87
MMP2P08253 MIR183-201ENST00000384958 110 ntBASIC3.4□□□□□ -1.87
MMP2P08253 MIR670-201ENST00000390142 98 ntBASIC3.4□□□□□ -1.87
MMP2P08253 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.4□□□□□ -1.87
MMP2P08253 RNU6-648P-201ENST00000410190 107 ntBASIC3.4□□□□□ -1.87
MMP2P08253 RNU4-55P-201ENST00000410731 137 ntBASIC3.4□□□□□ -1.87
MMP2P08253 RNU6-55P-201ENST00000411092 107 ntBASIC3.4□□□□□ -1.87
MMP2P08253 RNU6-954P-201ENST00000411355 107 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC126124.2-201ENST00000413542 321 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP2P08253 RPS3AP44-201ENST00000425466 790 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.4□□□□□ -1.87
MMP2P08253 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.4□□□□□ -1.87
MMP2P08253 VN1R34P-201ENST00000447387 883 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC023194.1-201ENST00000493084 308 ntBASIC3.4□□□□□ -1.87
MMP2P08253 HMGB1P29-201ENST00000505659 499 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP2P08253 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.4□□□□□ -1.87
MMP2P08253 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.4□□□□□ -1.87
MMP2P08253 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP2P08253 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP2P08253 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP2P08253 AP005205.1-201ENST00000563503 508 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP2P08253 AC005951.2-201ENST00000576282 495 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC105224.1-201ENST00000587055 421 ntBASIC3.4□□□□□ -1.87
MMP2P08253 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.4□□□□□ -1.87
MMP2P08253 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.4□□□□□ -1.87
MMP2P08253 AL606834.2-201ENST00000602954 668 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC007684.1-201ENST00000609671 477 ntBASIC3.4□□□□□ -1.87
MMP2P08253 SDR42E1P2-201ENST00000614861 481 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AL355365.1-201ENST00000616480 294 ntBASIC3.4□□□□□ -1.87
MMP2P08253 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC124864.2-201ENST00000624736 186 ntBASIC3.4□□□□□ -1.87
MMP2P08253 SEPT14P19-203ENST00000633205 211 ntBASIC3.4□□□□□ -1.87
MMP2P08253 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
MMP2P08253 U6.105-201ENST00000637379 88 ntBASIC3.4□□□□□ -1.87
MMP2P08253 OR5H6-203ENST00000642105 978 ntBASIC3.4□□□□□ -1.87
MMP2P08253 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.4□□□□□ -1.87
MMP2P08253 CR848007.1-201ENST00000442354 1699 ntBASIC3.39□□□□□ -1.87
MMP2P08253 TNPO1P3-201ENST00000436471 2662 ntBASIC3.39□□□□□ -1.87
MMP2P08253 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MMP2P08253 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.39□□□□□ -1.87
MMP2P08253 RNA5SP50-201ENST00000363731 107 ntBASIC3.39□□□□□ -1.87
MMP2P08253 RNU1-33P-201ENST00000364249 162 ntBASIC3.39□□□□□ -1.87
MMP2P08253 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.39□□□□□ -1.87
MMP2P08253 RNU6-517P-201ENST00000384362 110 ntBASIC3.39□□□□□ -1.87
MMP2P08253 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
MMP2P08253 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MMP2P08253 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MMP2P08253 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.39□□□□□ -1.87
MMP2P08253 AL359634.1-202ENST00000404721 284 ntBASIC3.39□□□□□ -1.87
MMP2P08253 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.39□□□□□ -1.87
MMP2P08253 AL356968.1-201ENST00000416622 474 ntBASIC3.39□□□□□ -1.87
MMP2P08253 AC018630.2-202ENST00000422992 927 ntBASIC3.39□□□□□ -1.87
MMP2P08253 UBE2D3P2-201ENST00000424409 445 ntBASIC3.39□□□□□ -1.87
MMP2P08253 USP12PX-201ENST00000432383 1057 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms