Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU4-78P-201ENST00000410940 126 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 OR1AA1P-201ENST00000419597 916 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AF228730.4-201ENST00000421457 183 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 EZH2P1-201ENST00000431167 291 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 RPS20P5-201ENST00000434808 360 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 AC079781.2-201ENST00000446424 169 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 MTND3P16-201ENST00000452205 344 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 ANP32BP2-201ENST00000454525 545 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 RPS29P15-201ENST00000458329 171 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 U3.44-201ENST00000458938 192 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 HMGN2P26-201ENST00000463169 339 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AC008155.2-201ENST00000464337 397 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AL049714.1-201ENST00000466686 347 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 RPS26P15-201ENST00000488067 348 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 RNU6-1314P-201ENST00000517139 104 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 RN7SKP234-201ENST00000517173 224 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 MIR4742-201ENST00000581069 85 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 PART1_1.1-201ENST00000611761 217 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AL365204.3-201ENST00000612448 685 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AL136313.1-201ENST00000624804 202 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AL133216.2-202ENST00000634512 349 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 MIR4496-201ENST00000635896 61 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 AC007656.2-201ENST00000624902 4547 ntBASIC4.18□□□□□ -1.74
HLA-DOAP06340 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.18□□□□□ -1.74
HLA-DOAP06340 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DOAP06340 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DOAP06340 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 SNORA63-201ENST00000363450 132 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 Y_RNA.162-201ENST00000363683 102 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 RNU5A-8P-201ENST00000364102 114 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 SNORA9-201ENST00000384215 133 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 MIR483-201ENST00000385070 76 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 RN7SKP32-201ENST00000410167 303 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 RN7SKP247-201ENST00000411094 308 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 RN7SKP53-201ENST00000411337 315 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC092447.6-201ENST00000414578 210 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC004552.1-201ENST00000419089 348 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 AL645937.1-202ENST00000421799 937 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 MTCO2P12-201ENST00000427426 682 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC005534.2-201ENST00000431047 433 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 IFNA20P-201ENST00000436840 528 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AL121877.1-201ENST00000453704 622 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AL356010.1-201ENST00000456364 102 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 RPS26P3-201ENST00000470205 348 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC090543.2-201ENST00000483963 348 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC004057.1-201ENST00000485827 348 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC092436.1-201ENST00000506450 503 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 SNORD116-26-201ENST00000516006 96 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 SNORD27.1-201ENST00000516319 72 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 RNU6-798P-201ENST00000516912 103 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 SETP2-201ENST00000553886 926 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC026464.5-201ENST00000562497 722 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 MIR5195-201ENST00000583555 115 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC105224.1-201ENST00000587055 421 ntBASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DOAP06340 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DOAP06340 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DOAP06340 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HLA-DOAP06340 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
HLA-DOAP06340 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DOAP06340 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DOAP06340 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 SNORA62.1-201ENST00000364287 154 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 SNORA51.2-201ENST00000364595 132 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 AC019155.1-201ENST00000382242 574 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 Y_RNA.474-201ENST00000384341 102 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 RNU6-831P-201ENST00000384548 107 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 SNORD17-201ENST00000390930 237 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HLA-DOAP06340 AL121834.1-202ENST00000404494 277 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 MIR1302-11-201ENST00000408051 138 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 MIR1302-9-201ENST00000408365 138 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 U3.39-201ENST00000408569 239 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 MIR1302-10-201ENST00000408734 138 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 MTND3P8-201ENST00000412909 339 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 AC005517.2-201ENST00000424673 553 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 MTCYBP6-201ENST00000441810 138 ntBASIC4.16□□□□□ -1.74
HLA-DOAP06340 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.16□□□□□ -1.74
HLA-DOAP06340 HMGB3P22-202ENST00000451823 572 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms