Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.42□□□□□ -2.18
TNFP01375 RNU6-220P-201ENST00000390919 107 ntBASIC1.42□□□□□ -2.18
TNFP01375 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.42□□□□□ -2.18
TNFP01375 RNU6-321P-201ENST00000410912 106 ntBASIC1.42□□□□□ -2.18
TNFP01375 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.42□□□□□ -2.18
TNFP01375 AC004965.1-201ENST00000413033 213 ntBASIC1.42□□□□□ -2.18
TNFP01375 CYCSP48-201ENST00000417124 323 ntBASIC1.42□□□□□ -2.18
TNFP01375 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.42□□□□□ -2.18
TNFP01375 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.42□□□□□ -2.18
TNFP01375 AC234781.2-201ENST00000426370 994 ntBASIC1.42□□□□□ -2.18
TNFP01375 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.42□□□□□ -2.18
TNFP01375 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.42□□□□□ -2.18
TNFP01375 AC107626.1-201ENST00000471084 183 ntBASIC1.42□□□□□ -2.18
TNFP01375 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
TNFP01375 AC108078.2-201ENST00000510750 236 ntBASIC1.42□□□□□ -2.18
TNFP01375 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.42□□□□□ -2.18
TNFP01375 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.42□□□□□ -2.18
TNFP01375 EIF4EP5-201ENST00000528228 640 ntBASIC1.42□□□□□ -2.18
TNFP01375 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.42□□□□□ -2.18
TNFP01375 CYCSP2-201ENST00000558168 301 ntBASIC1.42□□□□□ -2.18
TNFP01375 MIR4421-201ENST00000578133 69 ntBASIC1.42□□□□□ -2.18
TNFP01375 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.42□□□□□ -2.18
TNFP01375 AL109918.3-201ENST00000603072 338 ntBASIC1.42□□□□□ -2.18
TNFP01375 AC116618.1-201ENST00000634617 774 ntBASIC1.42□□□□□ -2.18
TNFP01375 MTND2P41-201ENST00000637599 773 ntBASIC1.42□□□□□ -2.18
TNFP01375 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TNFP01375 AC016716.1-201ENST00000265882 708 ntBASIC1.41□□□□□ -2.18
TNFP01375 MIR337-201ENST00000362281 93 ntBASIC1.41□□□□□ -2.18
TNFP01375 RNU1-57P-201ENST00000384491 166 ntBASIC1.41□□□□□ -2.18
TNFP01375 AL512604.1-201ENST00000404812 257 ntBASIC1.41□□□□□ -2.18
TNFP01375 POLHP1-201ENST00000411806 470 ntBASIC1.41□□□□□ -2.18
TNFP01375 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.41□□□□□ -2.18
TNFP01375 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.41□□□□□ -2.18
TNFP01375 FABP5P3-201ENST00000437960 408 ntBASIC1.41□□□□□ -2.18
TNFP01375 SNRPFP4-201ENST00000456366 242 ntBASIC1.41□□□□□ -2.18
TNFP01375 MTCO1P42-201ENST00000457379 726 ntBASIC1.41□□□□□ -2.18
TNFP01375 RNU7-23P-201ENST00000459465 62 ntBASIC1.41□□□□□ -2.18
TNFP01375 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
TNFP01375 BZW1P2-201ENST00000473537 826 ntBASIC1.41□□□□□ -2.18
TNFP01375 AC025181.1-201ENST00000477507 416 ntBASIC1.41□□□□□ -2.18
TNFP01375 AC005840.1-201ENST00000498412 377 ntBASIC1.41□□□□□ -2.18
TNFP01375 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFP01375 AC093770.1-201ENST00000511559 571 ntBASIC1.41□□□□□ -2.18
TNFP01375 SNORA31.25-201ENST00000517242 134 ntBASIC1.41□□□□□ -2.18
TNFP01375 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.41□□□□□ -2.18
TNFP01375 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
TNFP01375 AP001542.2-201ENST00000593141 364 ntBASIC1.41□□□□□ -2.18
TNFP01375 AC025588.3-201ENST00000604182 274 ntBASIC1.41□□□□□ -2.18
TNFP01375 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.41□□□□□ -2.18
TNFP01375 AC130650.2-201ENST00000618736 2403 ntBASIC1.4□□□□□ -2.18
TNFP01375 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
TNFP01375 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.4□□□□□ -2.19
TNFP01375 RNU6-821P-201ENST00000390995 107 ntBASIC1.4□□□□□ -2.19
TNFP01375 RNU6-233P-201ENST00000410845 141 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.4□□□□□ -2.19
TNFP01375 PAICSP7-201ENST00000419829 962 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC007098.1-201ENST00000420122 367 ntBASIC1.4□□□□□ -2.19
TNFP01375 PGBD4P6-201ENST00000421501 610 ntBASIC1.4□□□□□ -2.19
TNFP01375 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.4□□□□□ -2.19
TNFP01375 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.4□□□□□ -2.19
TNFP01375 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.4□□□□□ -2.19
TNFP01375 AL714022.1-201ENST00000439897 151 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC093155.1-201ENST00000440164 826 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC124916.1-201ENST00000444020 547 ntBASIC1.4□□□□□ -2.19
TNFP01375 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.4□□□□□ -2.19
TNFP01375 Z82190.1-201ENST00000454534 490 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC116337.2-201ENST00000477662 156 ntBASIC1.4□□□□□ -2.19
TNFP01375 RPL7P18-201ENST00000478965 734 ntBASIC1.4□□□□□ -2.19
TNFP01375 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.4□□□□□ -2.19
TNFP01375 AC104108.1-201ENST00000509930 412 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.4□□□□□ -2.19
TNFP01375 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.4□□□□□ -2.19
TNFP01375 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.4□□□□□ -2.19
TNFP01375 AC010928.2-201ENST00000588017 287 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC021749.1-201ENST00000604322 607 ntBASIC1.4□□□□□ -2.19
TNFP01375 AP002826.1-201ENST00000608835 315 ntBASIC1.4□□□□□ -2.19
TNFP01375 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TNFP01375 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.4□□□□□ -2.19
TNFP01375 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TNFP01375 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TNFP01375 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
TNFP01375 RNU4-42P-201ENST00000364738 142 ntBASIC1.39□□□□□ -2.19
TNFP01375 RNU6-1197P-201ENST00000391183 107 ntBASIC1.39□□□□□ -2.19
TNFP01375 AL356432.1-201ENST00000405809 419 ntBASIC1.39□□□□□ -2.19
TNFP01375 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.39□□□□□ -2.19
TNFP01375 RPS15AP12-201ENST00000419498 388 ntBASIC1.39□□□□□ -2.19
TNFP01375 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.39□□□□□ -2.19
TNFP01375 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.39□□□□□ -2.19
TNFP01375 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.39□□□□□ -2.19
TNFP01375 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.39□□□□□ -2.19
TNFP01375 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.39□□□□□ -2.19
TNFP01375 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.39□□□□□ -2.19
TNFP01375 HMGN1P8-201ENST00000463578 288 ntBASIC1.39□□□□□ -2.19
TNFP01375 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.39□□□□□ -2.19
TNFP01375 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.39□□□□□ -2.19
TNFP01375 AC112518.2-201ENST00000508565 425 ntBASIC1.39□□□□□ -2.19
TNFP01375 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.39□□□□□ -2.19
TNFP01375 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.39□□□□□ -2.19
TNFP01375 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.39□□□□□ -2.19
TNFP01375 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms