Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLPTM1O96005 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
CLPTM1O96005 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.12□□□□□ -1.91
CLPTM1O96005 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.11□□□□□ -1.91
CLPTM1O96005 MTCO1P9-201ENST00000505577 1534 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLPTM1O96005 SNORD9-201ENST00000362566 104 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 RNU5A-8P-201ENST00000364102 114 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPTM1O96005 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLPTM1O96005 MIR670-201ENST00000390142 98 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AL031121.1-201ENST00000406553 254 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 ATP5A1P2-201ENST00000412323 255 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 FCF1P9-201ENST00000412546 282 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.11□□□□□ -1.91
CLPTM1O96005 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC079780.1-201ENST00000428259 207 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC104332.2-201ENST00000429959 156 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC091286.1-201ENST00000431233 461 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC119618.1-201ENST00000434191 222 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.11□□□□□ -1.91
CLPTM1O96005 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AL359385.1-201ENST00000456509 365 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC093899.1-201ENST00000457984 376 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC010285.1-201ENST00000470580 392 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 RPL21P129-201ENST00000491732 478 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLPTM1O96005 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC108078.1-201ENST00000508073 725 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AF213884.2-201ENST00000510417 903 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC022483.1-201ENST00000514020 567 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 RNU6-506P-201ENST00000516553 94 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 SNORA70.18-201ENST00000516696 98 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 RNU6-1220P-201ENST00000517126 108 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC026403.1-201ENST00000518938 295 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.11□□□□□ -1.91
CLPTM1O96005 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.11□□□□□ -1.91
CLPTM1O96005 COX6CP3-201ENST00000580869 223 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AP003465.2-201ENST00000602571 373 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC245014.2-201ENST00000603689 287 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC010591.1-201ENST00000603941 649 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AL022154.1-201ENST00000604698 785 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC246785.4-201ENST00000605374 287 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 MIR98-201ENST00000606724 119 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC007038.2-201ENST00000608095 740 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AL161734.1-201ENST00000609720 557 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 TUG1_1.1-201ENST00000610654 145 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AL591516.1-201ENST00000611326 274 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AL158209.2-201ENST00000619266 216 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC006111.3-201ENST00000622137 383 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AL157786.1-207ENST00000627771 695 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
CLPTM1O96005 AL138713.1-201ENST00000624026 2130 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
CLPTM1O96005 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLPTM1O96005 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CLPTM1O96005 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 MIR23B-201ENST00000384832 97 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 MIR548F1-201ENST00000408667 84 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 Z99755.1-201ENST00000414048 380 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AC069157.1-201ENST00000421749 137 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPTM1O96005 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.1□□□□□ -1.91
CLPTM1O96005 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPTM1O96005 C1DP4-201ENST00000455429 424 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AC106707.2-201ENST00000484182 374 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 Vault.3-201ENST00000516676 95 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPTM1O96005 DEFB108A-201ENST00000530110 222 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC087481.2-201ENST00000565492 330 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AC010653.1-201ENST00000571108 881 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.1□□□□□ -1.91
CLPTM1O96005 AC090970.3-201ENST00000612566 866 ntBASIC3.1□□□□□ -1.91
CLPTM1O96005 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms