Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC091953.2-201ENST00000623979 160 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 AC091925.2-201ENST00000625059 256 ntBASIC3.83□□□□□ -1.8
TOP3BO95985 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP3BO95985 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TOP3BO95985 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TOP3BO95985 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.83□□□□□ -1.8
TOP3BO95985 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TOP3BO95985 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 AC092125.1-201ENST00000562568 1995 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP3BO95985 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 AC007685.1-201ENST00000329806 452 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 Y_RNA.58-201ENST00000362807 102 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 Y_RNA.154-201ENST00000363624 102 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 SNORA51.2-201ENST00000364595 132 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 RNY3P1-201ENST00000365085 102 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 Y_RNA.326-201ENST00000365176 113 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 RNY3-201ENST00000365484 102 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 Y_RNA.394-201ENST00000383942 103 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 Y_RNA.490-201ENST00000384413 102 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 RNU6-1158P-201ENST00000391167 107 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 HLFP1-201ENST00000402375 499 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 SNORA3.3-201ENST00000408712 125 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 BTF3L4P3-201ENST00000418879 476 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AL158156.1-201ENST00000422509 473 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC005517.2-201ENST00000424673 553 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 NDUFA5P4-201ENST00000436704 385 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 CBWD4P-201ENST00000445695 655 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP3BO95985 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP3BO95985 AC106872.2-201ENST00000494303 480 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP3BO95985 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP3BO95985 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP3BO95985 RNU6-27P-201ENST00000516146 107 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC105029.1-201ENST00000520250 669 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP3BO95985 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP3BO95985 OR5B19P-201ENST00000531766 928 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC007458.1-201ENST00000542812 373 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.82□□□□□ -1.8
TOP3BO95985 AC091516.1-201ENST00000549191 703 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.82□□□□□ -1.8
TOP3BO95985 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.82□□□□□ -1.8
TOP3BO95985 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP3BO95985 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP3BO95985 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP3BO95985 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.82□□□□□ -1.8
TOP3BO95985 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 RNA5SP108-201ENST00000605921 117 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AL391813.2-201ENST00000609113 322 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC006329.2-201ENST00000611491 394 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC040168.1-201ENST00000623594 991 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 AC244205.2-202ENST00000635781 342 ntBASIC3.82□□□□□ -1.8
TOP3BO95985 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TOP3BO95985 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TOP3BO95985 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.82□□□□□ -1.8
TOP3BO95985 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
TOP3BO95985 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
TOP3BO95985 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TOP3BO95985 MTCO1P24-201ENST00000515438 1558 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TOP3BO95985 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
TOP3BO95985 Y_RNA.493-201ENST00000384422 102 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TOP3BO95985 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TOP3BO95985 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP3BO95985 AC127526.1-201ENST00000417526 366 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP3BO95985 AC097713.2-201ENST00000430199 356 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AL365400.1-201ENST00000431854 640 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 RPL36AP53-201ENST00000432891 316 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 SNORA71B-202ENST00000439232 272 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 RPS15AP9-201ENST00000439856 381 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 BNIP3P2-201ENST00000441221 577 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 RPL23AP33-201ENST00000442301 452 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AP1S2P1-201ENST00000457344 379 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 SNORD108-201ENST00000459332 71 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 RPS3AP50-201ENST00000487064 803 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 RNA5SP401-201ENST00000515920 127 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 RN7SKP116-201ENST00000516902 319 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AC107934.1-201ENST00000522215 217 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.81□□□□□ -1.8
TOP3BO95985 AC022616.3-201ENST00000523940 148 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AP003072.2-201ENST00000527756 676 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 OR4P1P-201ENST00000530808 1136 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AP003072.1-201ENST00000531740 145 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 AC011611.1-201ENST00000552179 197 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP3BO95985 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.81□□□□□ -1.8
TOP3BO95985 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
TOP3BO95985 AC004853.1-201ENST00000604902 698 ntBASIC3.81□□□□□ -1.8
TOP3BO95985 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.81□□□□□ -1.8
TOP3BO95985 AC100810.6-201ENST00000638068 285 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms