Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD3O95983 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD3O95983 RPL12P50-201ENST00000603116 116 ntBASIC2.72□□□□□ -1.97
MBD3O95983 AL161734.1-201ENST00000609720 557 ntBASIC2.72□□□□□ -1.97
MBD3O95983 AL136981.2-201ENST00000617319 734 ntBASIC2.72□□□□□ -1.97
MBD3O95983 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD3O95983 AP000676.3-201ENST00000623299 569 ntBASIC2.72□□□□□ -1.97
MBD3O95983 AC073308.1-201ENST00000623696 305 ntBASIC2.72□□□□□ -1.97
MBD3O95983 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MBD3O95983 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
MBD3O95983 RNA5SP171-201ENST00000391071 115 ntBASIC2.71□□□□□ -1.98
MBD3O95983 PIGPP2-201ENST00000411569 458 ntBASIC2.71□□□□□ -1.98
MBD3O95983 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD3O95983 AL451054.2-201ENST00000420896 202 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AC091390.3-201ENST00000426478 338 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3O95983 RSU1P2-202ENST00000437884 485 ntBASIC2.71□□□□□ -1.98
MBD3O95983 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.71□□□□□ -1.98
MBD3O95983 AC087588.1-201ENST00000462203 316 ntBASIC2.71□□□□□ -1.98
MBD3O95983 LINC00888-204ENST00000487386 421 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD3O95983 AC093281.2-201ENST00000510153 597 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD3O95983 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
MBD3O95983 RN7SKP24-201ENST00000515888 284 ntBASIC2.71□□□□□ -1.98
MBD3O95983 RNA5SP367-201ENST00000516557 118 ntBASIC2.71□□□□□ -1.98
MBD3O95983 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.71□□□□□ -1.98
MBD3O95983 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD3O95983 MTND4P33-201ENST00000556706 766 ntBASIC2.71□□□□□ -1.98
MBD3O95983 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3O95983 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3O95983 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3O95983 MIR4325-201ENST00000583049 90 ntBASIC2.71□□□□□ -1.98
MBD3O95983 UBE2L4-201ENST00000587688 464 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.71□□□□□ -1.98
MBD3O95983 MTCO2P2-201ENST00000591258 225 ntBASIC2.71□□□□□ -1.98
MBD3O95983 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD3O95983 AL137843.1-201ENST00000605078 385 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AL139344.1-201ENST00000605228 195 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AC239868.4-201ENST00000608318 671 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AC010133.1-201ENST00000615809 842 ntBASIC2.71□□□□□ -1.98
MBD3O95983 AL158801.5-201ENST00000623123 465 ntBASIC2.71□□□□□ -1.98
MBD3O95983 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3O95983 AC099063.3-201ENST00000642066 185 ntBASIC2.71□□□□□ -1.98
MBD3O95983 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
MBD3O95983 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
MBD3O95983 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
MBD3O95983 CKAP2P1-201ENST00000555477 2049 ntBASIC2.7□□□□□ -1.98
MBD3O95983 SNORA4.1-201ENST00000364263 144 ntBASIC2.7□□□□□ -1.98
MBD3O95983 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
MBD3O95983 RNU6-157P-201ENST00000383957 107 ntBASIC2.7□□□□□ -1.98
MBD3O95983 RNA5SP354-201ENST00000391247 136 ntBASIC2.7□□□□□ -1.98
MBD3O95983 RNA5SP492-201ENST00000411330 114 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.7□□□□□ -1.98
MBD3O95983 RPL17P12-201ENST00000413391 526 ntBASIC2.7□□□□□ -1.98
MBD3O95983 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.7□□□□□ -1.98
MBD3O95983 HMGB1P49-201ENST00000418882 569 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AL035407.1-201ENST00000429211 571 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.7□□□□□ -1.98
MBD3O95983 MTCO3P45-201ENST00000443036 613 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AL031659.1-201ENST00000447075 539 ntBASIC2.7□□□□□ -1.98
MBD3O95983 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.7□□□□□ -1.98
MBD3O95983 USP9YP25-201ENST00000457708 443 ntBASIC2.7□□□□□ -1.98
MBD3O95983 MTND4LP3-201ENST00000468320 276 ntBASIC2.7□□□□□ -1.98
MBD3O95983 RPL23AP70-201ENST00000483361 460 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AC104435.1-201ENST00000483483 166 ntBASIC2.7□□□□□ -1.98
MBD3O95983 RPS27P26-201ENST00000494583 239 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.7□□□□□ -1.98
MBD3O95983 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.7□□□□□ -1.98
MBD3O95983 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
MBD3O95983 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.7□□□□□ -1.98
MBD3O95983 AC068587.4-201ENST00000533893 186 ntBASIC2.7□□□□□ -1.98
MBD3O95983 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.7□□□□□ -1.98
MBD3O95983 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.7□□□□□ -1.98
MBD3O95983 AC105137.2-201ENST00000569073 466 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AC005951.2-201ENST00000576282 495 ntBASIC2.7□□□□□ -1.98
MBD3O95983 MIR4446-201ENST00000578505 67 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AL035413.2-201ENST00000604801 525 ntBASIC2.7□□□□□ -1.98
MBD3O95983 SDR42E1P2-201ENST00000614861 481 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AP000484.1-201ENST00000620067 1252 ntBASIC2.7□□□□□ -1.98
MBD3O95983 AP001002.2-201ENST00000625137 386 ntBASIC2.7□□□□□ -1.98
MBD3O95983 MIR1291-201ENST00000627649 87 ntBASIC2.7□□□□□ -1.98
MBD3O95983 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MBD3O95983 MTND5P33-201ENST00000571250 1450 ntBASIC2.7□□□□□ -1.98
MBD3O95983 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
MBD3O95983 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
MBD3O95983 RNU6-931P-201ENST00000363850 107 ntBASIC2.69□□□□□ -1.98
MBD3O95983 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MBD3O95983 MTCO2P21-201ENST00000419780 677 ntBASIC2.69□□□□□ -1.98
MBD3O95983 USP9YP26-201ENST00000421008 661 ntBASIC2.69□□□□□ -1.98
MBD3O95983 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.69□□□□□ -1.98
MBD3O95983 AC009414.1-201ENST00000427200 443 ntBASIC2.69□□□□□ -1.98
MBD3O95983 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.69□□□□□ -1.98
MBD3O95983 USP12PX-201ENST00000432383 1057 ntBASIC2.69□□□□□ -1.98
MBD3O95983 FCF1P1-201ENST00000432690 571 ntBASIC2.69□□□□□ -1.98
MBD3O95983 AC105272.1-201ENST00000438604 198 ntBASIC2.69□□□□□ -1.98
MBD3O95983 NANOGNBP1-201ENST00000448444 480 ntBASIC2.69□□□□□ -1.98
MBD3O95983 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.69□□□□□ -1.98
MBD3O95983 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.69□□□□□ -1.98
MBD3O95983 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms