Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RPL12P50-201ENST00000603116 116 ntBASIC3.05□□□□□ -1.92
SIX3O95343 U73023.1-201ENST00000603134 700 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC122133.1-201ENST00000613964 233 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC009159.1-201ENST00000618386 642 ntBASIC3.05□□□□□ -1.92
SIX3O95343 FRG1KP-201ENST00000623592 341 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC068880.5-201ENST00000624331 290 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC006386.2-201ENST00000624491 75 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC012005.1-201ENST00000624575 75 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AL359693.1-201ENST00000614959 2407 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AP003122.5-201ENST00000527668 3766 ntBASIC3.05□□□□□ -1.92
SIX3O95343 MAPK10-362ENST00000641864 4484 ntBASIC3.05□□□□□ -1.92
SIX3O95343 AC091564.4-201ENST00000533934 2194 ntBASIC3.04□□□□□ -1.92
SIX3O95343 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
SIX3O95343 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX3O95343 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SIX3O95343 RNU6-270P-201ENST00000364131 105 ntBASIC3.04□□□□□ -1.92
SIX3O95343 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.04□□□□□ -1.92
SIX3O95343 AL359634.1-202ENST00000404721 284 ntBASIC3.04□□□□□ -1.92
SIX3O95343 FCF1P10-201ENST00000407590 479 ntBASIC3.04□□□□□ -1.92
SIX3O95343 RNA5SP120-201ENST00000410900 112 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX3O95343 ATG3P1-201ENST00000419507 911 ntBASIC3.04□□□□□ -1.92
SIX3O95343 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.04□□□□□ -1.92
SIX3O95343 RPL7P46-201ENST00000425129 740 ntBASIC3.04□□□□□ -1.92
SIX3O95343 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.04□□□□□ -1.92
SIX3O95343 SAR1AP4-201ENST00000429225 591 ntBASIC3.04□□□□□ -1.92
SIX3O95343 MED14P1-201ENST00000430517 648 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AL121890.1-201ENST00000435457 205 ntBASIC3.04□□□□□ -1.92
SIX3O95343 HMGB1P18-201ENST00000438801 619 ntBASIC3.04□□□□□ -1.92
SIX3O95343 UQCRHP3-201ENST00000451503 251 ntBASIC3.04□□□□□ -1.92
SIX3O95343 SSXP1-201ENST00000453640 473 ntBASIC3.04□□□□□ -1.92
SIX3O95343 RPS26P21-201ENST00000475397 348 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AC092185.1-201ENST00000491371 97 ntBASIC3.04□□□□□ -1.92
SIX3O95343 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX3O95343 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX3O95343 ARL4AP2-201ENST00000507378 601 ntBASIC3.04□□□□□ -1.92
SIX3O95343 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX3O95343 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX3O95343 MRPS33P3-201ENST00000513456 322 ntBASIC3.04□□□□□ -1.92
SIX3O95343 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.04□□□□□ -1.92
SIX3O95343 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX3O95343 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.04□□□□□ -1.92
SIX3O95343 AC123904.2-201ENST00000548059 300 ntBASIC3.04□□□□□ -1.92
SIX3O95343 MIR3146-201ENST00000580367 79 ntBASIC3.04□□□□□ -1.92
SIX3O95343 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
SIX3O95343 AP000403.1-201ENST00000603349 851 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AL355877.2-201ENST00000603670 358 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AL359999.1-201ENST00000604513 294 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AL136363.1-201ENST00000605349 337 ntBASIC3.04□□□□□ -1.92
SIX3O95343 YPEL5P2-201ENST00000605553 359 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AC018638.7-201ENST00000605836 1114 ntBASIC3.04□□□□□ -1.92
SIX3O95343 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.04□□□□□ -1.92
SIX3O95343 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.04□□□□□ -1.92
SIX3O95343 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SIX3O95343 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX3O95343 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SIX3O95343 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SIX3O95343 OR1S2-201ENST00000302592 978 ntBASIC3.03□□□□□ -1.92
SIX3O95343 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX3O95343 RNU6-1284P-201ENST00000363701 100 ntBASIC3.03□□□□□ -1.92
SIX3O95343 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX3O95343 MRPL42P2-201ENST00000403169 426 ntBASIC3.03□□□□□ -1.92
SIX3O95343 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SIX3O95343 NDUFS5P1-201ENST00000405668 289 ntBASIC3.03□□□□□ -1.92
SIX3O95343 RNU6-920P-201ENST00000410926 92 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX3O95343 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX3O95343 RPS15AP12-201ENST00000419498 388 ntBASIC3.03□□□□□ -1.92
SIX3O95343 COTL1P1-201ENST00000422309 375 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC092047.1-201ENST00000424997 240 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC005300.1-201ENST00000428401 373 ntBASIC3.03□□□□□ -1.92
SIX3O95343 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX3O95343 FCF1P1-201ENST00000432690 571 ntBASIC3.03□□□□□ -1.92
SIX3O95343 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX3O95343 AL353705.1-201ENST00000433468 480 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AL590365.1-201ENST00000450788 243 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AL133217.1-201ENST00000450980 425 ntBASIC3.03□□□□□ -1.92
SIX3O95343 RPL12P25-201ENST00000455592 494 ntBASIC3.03□□□□□ -1.92
SIX3O95343 RPL26P9-201ENST00000457466 433 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC013267.1-201ENST00000458227 267 ntBASIC3.03□□□□□ -1.92
SIX3O95343 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX3O95343 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SIX3O95343 RPL30P6-201ENST00000475925 342 ntBASIC3.03□□□□□ -1.92
SIX3O95343 RN7SL20P-201ENST00000488827 297 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC096576.1-201ENST00000489014 359 ntBASIC3.03□□□□□ -1.92
SIX3O95343 RPF2P2-201ENST00000504693 896 ntBASIC3.03□□□□□ -1.92
SIX3O95343 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SIX3O95343 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX3O95343 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SIX3O95343 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX3O95343 RNU6-927P-201ENST00000516199 100 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC100870.1-201ENST00000522035 505 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.03□□□□□ -1.92
SIX3O95343 TRAV37-201ENST00000553906 342 ntBASIC3.03□□□□□ -1.92
SIX3O95343 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX3O95343 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.03□□□□□ -1.92
SIX3O95343 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.03□□□□□ -1.92
SIX3O95343 AC091489.2-201ENST00000566263 604 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.03□□□□□ -1.92
SIX3O95343 AC105129.3-201ENST00000605455 485 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms