Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40AO75400 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PRPF40AO75400 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF40AO75400 UBE2L2-201ENST00000254302 429 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 RNU6-398P-201ENST00000384143 109 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 Y_RNA.480-201ENST00000384364 102 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 MIR606-201ENST00000384851 96 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF40AO75400 RNA5SP39-201ENST00000411245 120 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 RNU6-954P-201ENST00000411355 107 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 RPS20P14-201ENST00000412545 360 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AL451062.2-201ENST00000427515 271 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 RPL23AP93-201ENST00000440847 484 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF40AO75400 MRPS31P2-201ENST00000451581 518 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AC087884.1-201ENST00000469738 328 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40AO75400 AC006463.2-201ENST00000473326 348 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PRPF40AO75400 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF40AO75400 ELOCP31-201ENST00000540463 467 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 AC125257.1-201ENST00000560400 2930 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 MIR432-201ENST00000606207 94 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 AC107294.1-201ENST00000609524 467 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 AC040896.1-201ENST00000613819 479 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 AL157817.1-201ENST00000614264 790 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 MIR6128-201ENST00000615528 109 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF40AO75400 AL512643.1-201ENST00000635735 524 ntBASIC5.1□□□□□ -1.59
PRPF40AO75400 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
PRPF40AO75400 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40AO75400 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40AO75400 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF40AO75400 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.09□□□□□ -1.59
PRPF40AO75400 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF40AO75400 ZNF137P-201ENST00000456718 1920 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 MTND5P10-201ENST00000603719 1809 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 ZNF285B-201ENST00000561698 1767 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF40AO75400 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PRPF40AO75400 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 AC079741.1-201ENST00000321498 212 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 RNA5SP388-201ENST00000362584 119 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 RNA5SP505-201ENST00000364748 108 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 RNU6-214P-201ENST00000384130 107 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 SNORA75.4-201ENST00000391278 119 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 EI24P1-201ENST00000416584 867 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AC245028.1-201ENST00000423259 256 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 Z82205.1-201ENST00000428456 297 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF40AO75400 RPL7P28-201ENST00000437739 740 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 H2AFZP6-201ENST00000444403 394 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF40AO75400 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF40AO75400 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF40AO75400 AC087588.1-201ENST00000462203 316 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF40AO75400 AC026801.1-201ENST00000497178 464 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AC025445.1-201ENST00000502728 300 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF40AO75400 MTCYBP40-201ENST00000509390 1135 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 PARP4P3-201ENST00000510265 317 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 RNU6-1016P-201ENST00000516689 94 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 RNU1-54P-201ENST00000517181 120 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.09□□□□□ -1.59
PRPF40AO75400 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF40AO75400 MIR548AC-201ENST00000585049 88 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PRPF40AO75400 AC012603.1-201ENST00000606424 528 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AL158196.1-201ENST00000616786 434 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF40AO75400 MIR7703-201ENST00000620784 77 ntBASIC5.09□□□□□ -1.59
PRPF40AO75400 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF40AO75400 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40AO75400 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF40AO75400 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF40AO75400 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF40AO75400 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.09□□□□□ -1.6
PRPF40AO75400 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF40AO75400 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PRPF40AO75400 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF40AO75400 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF40AO75400 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PRPF40AO75400 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.08□□□□□ -1.6
PRPF40AO75400 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PRPF40AO75400 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF40AO75400 AL590240.1-201ENST00000334118 313 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms