Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RPS20P1-201ENST00000434853 354 ntBASIC5.91□□□□□ -1.46
RNF40O75150 TBCAP1-201ENST00000436520 327 ntBASIC5.91□□□□□ -1.46
RNF40O75150 RPS12P17-201ENST00000438591 377 ntBASIC5.91□□□□□ -1.46
RNF40O75150 AC023141.8-201ENST00000442554 208 ntBASIC5.91□□□□□ -1.46
RNF40O75150 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF40O75150 RN7SL547P-201ENST00000490793 290 ntBASIC5.91□□□□□ -1.46
RNF40O75150 SUMO2P18-201ENST00000518873 252 ntBASIC5.91□□□□□ -1.46
RNF40O75150 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF40O75150 AL161629.2-201ENST00000615347 275 ntBASIC5.91□□□□□ -1.46
RNF40O75150 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
RNF40O75150 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF40O75150 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF40O75150 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF40O75150 AP004607.3-201ENST00000530354 3915 ntBASIC5.91□□□□□ -1.46
RNF40O75150 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF40O75150 AC139769.1-204ENST00000472297 1931 ntBASIC5.9□□□□□ -1.46
RNF40O75150 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RNF40O75150 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF40O75150 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF40O75150 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF40O75150 Y_RNA.75-201ENST00000362927 97 ntBASIC5.9□□□□□ -1.46
RNF40O75150 RNU6-151P-201ENST00000364158 107 ntBASIC5.9□□□□□ -1.46
RNF40O75150 RNU6-395P-201ENST00000365662 106 ntBASIC5.9□□□□□ -1.46
RNF40O75150 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF40O75150 RNU6-17P-201ENST00000384245 107 ntBASIC5.9□□□□□ -1.46
RNF40O75150 SNORA70-201ENST00000384436 135 ntBASIC5.9□□□□□ -1.46
RNF40O75150 RNU6-18P-201ENST00000384527 107 ntBASIC5.9□□□□□ -1.46
RNF40O75150 MIR1286-201ENST00000408112 78 ntBASIC5.9□□□□□ -1.46
RNF40O75150 RNA5SP56-201ENST00000410277 118 ntBASIC5.9□□□□□ -1.46
RNF40O75150 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF40O75150 PTGES3P4-201ENST00000426243 356 ntBASIC5.9□□□□□ -1.46
RNF40O75150 SEPT7P4-201ENST00000437076 306 ntBASIC5.9□□□□□ -1.46
RNF40O75150 RPS15AP7-201ENST00000439294 405 ntBASIC5.9□□□□□ -1.46
RNF40O75150 AC016700.2-201ENST00000446011 156 ntBASIC5.9□□□□□ -1.46
RNF40O75150 GAPDHP25-201ENST00000447061 1001 ntBASIC5.9□□□□□ -1.46
RNF40O75150 BX276092.4-201ENST00000452056 248 ntBASIC5.9□□□□□ -1.46
RNF40O75150 snoU13.30-201ENST00000458951 104 ntBASIC5.9□□□□□ -1.46
RNF40O75150 OR2AO1P-201ENST00000476497 403 ntBASIC5.9□□□□□ -1.46
RNF40O75150 RPL32P33-201ENST00000487023 394 ntBASIC5.9□□□□□ -1.46
RNF40O75150 FTH1P11-201ENST00000517577 551 ntBASIC5.9□□□□□ -1.46
RNF40O75150 AP000859.1-201ENST00000525536 307 ntBASIC5.9□□□□□ -1.46
RNF40O75150 AP002001.1-203ENST00000534002 267 ntBASIC5.9□□□□□ -1.46
RNF40O75150 AC005476.1-201ENST00000554427 397 ntBASIC5.9□□□□□ -1.46
RNF40O75150 MIR3684-201ENST00000579779 74 ntBASIC5.9□□□□□ -1.46
RNF40O75150 FKBP1AP1-201ENST00000594588 318 ntBASIC5.9□□□□□ -1.46
RNF40O75150 AC008749.1-201ENST00000597650 306 ntBASIC5.9□□□□□ -1.46
RNF40O75150 BPIFA4P-203ENST00000603168 689 ntBASIC5.9□□□□□ -1.46
RNF40O75150 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.9□□□□□ -1.46
RNF40O75150 AL360181.4-201ENST00000621752 134 ntBASIC5.9□□□□□ -1.46
RNF40O75150 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF40O75150 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RNF40O75150 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF40O75150 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF40O75150 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF40O75150 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF40O75150 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF40O75150 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
RNF40O75150 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
RNF40O75150 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF40O75150 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
RNF40O75150 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RNF40O75150 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.9□□□□□ -1.47
RNF40O75150 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF40O75150 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RNF40O75150 AC092681.1-201ENST00000297369 291 ntBASIC5.89□□□□□ -1.47
RNF40O75150 RNA5SP197-201ENST00000363357 119 ntBASIC5.89□□□□□ -1.47
RNF40O75150 SNORD14B-201ENST00000364533 90 ntBASIC5.89□□□□□ -1.47
RNF40O75150 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF40O75150 LAP3P1-201ENST00000403648 294 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AL357075.1-201ENST00000404107 726 ntBASIC5.89□□□□□ -1.47
RNF40O75150 RNU2-43P-201ENST00000410306 190 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AC113412.1-201ENST00000425840 504 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF40O75150 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF40O75150 IFNA11P-201ENST00000446352 526 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AC009237.7-201ENST00000447357 229 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AC016925.1-201ENST00000458303 298 ntBASIC5.89□□□□□ -1.47
RNF40O75150 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.89□□□□□ -1.47
RNF40O75150 RN7SL189P-201ENST00000468631 289 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AC100832.1-201ENST00000471945 383 ntBASIC5.89□□□□□ -1.47
RNF40O75150 RNU6-1095P-201ENST00000516148 108 ntBASIC5.89□□□□□ -1.47
RNF40O75150 RNU6-927P-201ENST00000516199 100 ntBASIC5.89□□□□□ -1.47
RNF40O75150 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF40O75150 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF40O75150 HMGB1P14-201ENST00000557424 591 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF40O75150 AC055872.1-201ENST00000570978 278 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF40O75150 MIR548X2-201ENST00000579776 100 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF40O75150 MIR7853-201ENST00000584820 132 ntBASIC5.89□□□□□ -1.47
RNF40O75150 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF40O75150 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.89□□□□□ -1.47
RNF40O75150 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF40O75150 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RNF40O75150 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF40O75150 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms