Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CEACAMP7-201ENST00000444105 496 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM13O60858 AC133473.1-201ENST00000455173 299 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC022034.3-201ENST00000471393 478 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM13O60858 AP002812.1-201ENST00000495378 474 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC022447.4-201ENST00000504053 364 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC104806.1-201ENST00000508720 308 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM13O60858 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM13O60858 RNA5SP497-201ENST00000516081 97 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 Y_RNA.703-201ENST00000516846 111 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 IGLVIV-53-201ENST00000520107 367 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC040926.1-201ENST00000530195 238 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC091516.1-201ENST00000549191 703 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC005899.2-201ENST00000584353 90 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.38□□□□□ -1.71
TRIM13O60858 AC012433.1-201ENST00000588916 398 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM13O60858 AC025588.3-201ENST00000604182 274 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM13O60858 AC015813.4-201ENST00000610469 179 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM13O60858 AC004792.1-201ENST00000614523 137 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM13O60858 MIR4272-201ENST00000635924 64 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 ASNSP1-201ENST00000518311 1939 ntBASIC4.38□□□□□ -1.71
TRIM13O60858 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM13O60858 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM13O60858 AC011266.1-201ENST00000624119 3569 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
TRIM13O60858 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 Y_RNA.64-201ENST00000362845 102 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 Y_RNA.464-201ENST00000384282 110 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 RNU6-95P-201ENST00000384697 107 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 RNU6-550P-201ENST00000391057 101 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 ENSAP1-201ENST00000392855 326 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 PCNPP3-201ENST00000393579 471 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 RAC1P3-201ENST00000416129 580 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 RPS23P10-201ENST00000416185 486 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 RPS12P10-201ENST00000427031 377 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 AL049745.1-201ENST00000433953 286 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM13O60858 RPL23AP93-201ENST00000440847 484 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM13O60858 RAC1P7-201ENST00000445367 377 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 AC116533.1-201ENST00000459748 321 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 RPS26P39-201ENST00000469206 341 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM13O60858 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM13O60858 SNORA25.11-201ENST00000515935 105 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 SNORA40.14-201ENST00000516543 86 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 RNU6-1069P-201ENST00000516612 133 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 AC068446.3-201ENST00000555285 382 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 SUB1P3-201ENST00000564581 315 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 AC130289.1-201ENST00000577321 73 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 MIR548AI-201ENST00000579940 88 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 MIR3667-201ENST00000581025 74 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 MIR3941-201ENST00000582572 103 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM13O60858 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM13O60858 AL138825.1-201ENST00000618587 192 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 AC103710.2-202ENST00000641454 2853 ntBASIC4.37□□□□□ -1.71
TRIM13O60858 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM13O60858 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM13O60858 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM13O60858 AL359854.1-201ENST00000614203 1594 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC006971.1-201ENST00000407916 4486 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM13O60858 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM13O60858 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM13O60858 MIR448-201ENST00000362131 111 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 Y_RNA.2-201ENST00000362330 96 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 SNORD62.1-201ENST00000362541 86 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RNVU1-3-201ENST00000364313 161 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RNU6-806P-201ENST00000365147 105 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RNA5SP240-201ENST00000365355 128 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM13O60858 Y_RNA.416-201ENST00000384014 113 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RNU6-306P-201ENST00000384617 107 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RNU2-14P-201ENST00000411053 191 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 RPLP0P7-201ENST00000416050 667 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AC114491.1-201ENST00000416095 246 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM13O60858 AC127537.2-201ENST00000439258 465 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 NOTCH2P1-201ENST00000443481 624 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 PCMTD1P1-201ENST00000455560 355 ntBASIC4.36□□□□□ -1.71
TRIM13O60858 AC010469.1-201ENST00000463864 576 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms